Table 1. Base composition of each position in the 5′ end sequences.
Position | A | G | C | T | %purine | T/C |
---|---|---|---|---|---|---|
1 | 13,425 | 21,682 | 4,836 | 3,164 | 81 | 0.65 |
2 | 5,752 | 12,470 | 7,865 | 17,006 | 42 | 2.16 |
3 | 6,194 | 11,992 | 8,826 | 16,100 | 42 | 1.82 |
4 | 6,646 | 12,396 | 6,667 | 17,390 | 44 | 2.61 |
10 | 7,276 | 11,342 | 10,996 | 13,448 | 43 | 1.22 |
20 | 7,769 | 11,058 | 11,325 | 12,939 | 44 | 1.14 |
The occurrence of each base was counted at each position. The %purine was calculated as 100 × (A + G)/(A + G + C + T)