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. 2003 Jul;77(13):7601–7610. doi: 10.1128/JVI.77.13.7601-7610.2003

TABLE 1.

Primers used for site-directed mutagenesis of UL34a

Charged cluster mutant Primer sequence (5′→3′) Restriction site introduced Wild-type amino acid sequence Mutant amino acid sequence
CL01 GAACGAGACCCgCGAAGGCGgCACCTGGGTGGCC HphIb GDAFE GAAFA
CL02 GGGACGATAAGcgcAATTgcCTGAAGCAGACCCTCG MfeI QRIRL QAIAL
CL03 CGTCCCATCTACGTTGgccGGCGGGGcCGGGGAGGCG NgoMIV LRGGD LAGGA
CL04 ACGTTGCGGGGCGGGGcCGGGGctGCaGGCCCCTACTCTCCC PstI DGEAG AGAAG
CL05 GGGAAACGACgCGgCGGACCCGgCATGGCCATGAAAC PleIb DGSDE AGSAA
CL06 GCCCAGTCGTTCATAAGCgctAgcACATACgCGATGGGAAACG NheI IEYVL IAYAL
CL07 ATCGAGTATGTACTGgcGCTTATGAACGcgTGGGCCGAGGTCCCG MluI RLMND ALMNA
CL08 CTGTCCCTCGGCGcgCTaGcCACCATCAAGGGG NheI GDLDT GALAT
CL09 GGCGACCTGGcCACCATCgcGGGGCGGCTCG MscI LDTIK LATIA
CL10 CCTGGACACCATCgcGGGagcGCTCGGCCTGG AfeI IKGRL IAGAL
CL11 CCATCAAGGGGgcGCTCGGCCTGGcgGCCCGGCCGATG HaeII RLGLD ALGLA
CL12 GCGGCTCGGCCTGGcTGCggcGCCGATGATGGCCAG KasI LDARP LAAAP
CL13 R:ATCAGCTGCTTTGTGgcCATGCCtgcaGTGCAGCTCGCGTTT PstI VRMPR VAMPA
L:CAAACGCGAGCTGCACtgcaGGCATGgcCACAAAGCAGCTGA
CL14 L:CAGGATCCGTCTCGTCgcTCCGGCtgCagCGGGGCCCATGAACCG PstI EDAGR AAAGA
R:CGGTTCATGGGCCCCGctGcaGCCGGAgcGACGAGACGGATCCTG
CL15 R:CCCGAAGATGCCGGAgcGACtgcAgcGATCCTGTGCCGCGCCG PstI GRTGG GATAA
L:CGGCGCGGCACAGGATCgcTgcaGTCgcTCCGGCATCTTCGGG
CL16 GCCGGACGGACGAGAgcGATCCTGTGCgcCGCCGCCGAGCAGGCT BamHIb RILCR AILCA
CL17 R:GAGCAGGCTATTACCgcTgcCgcTgcAACCCGGCGGTCCCGG HpyCH4IV RRRRT RRSRE
L:CCGGGACCGCCGGGTTgcAgcGgcAgcGGTAATAGCCTGCTC
CL18 R:CGTCGCCGCCGAACCgcGgcGTCCgctGcaGCGTACGGGGCCGAG PstI RRSRE AASAA
L:CCGGCCTCGGCCCCGTACGCtcGagcGGACgcCgcGGTTCGGCGGCG ACGGGTAA
CL19 R:GCCGGAACGGGTTTCgcGGCtgcaGGGGcCGGTTTTGGCCCGCTC PstI RARGD AAAGD
L:GAGCGGGCCAAAACCGgCCCCtgcaGCCgcGAAACCCGTTCCGGC
a

Lowercase letters indicate bases that differ from the wild-type HSV-1 sequence.

b

Restriction site was eliminated in the mutant.