TABLE 4.
Identities of peaks obtained from SSCP analysis of the high-GC% gram-positive bacterial community
Peaka | Relative sequences | % Identityb | GenBank accession no. |
---|---|---|---|
r | Brevibacterium avium/linens | 99 | Y17962 |
s | Propionibacterium freudenreichii | 100 | Y10819 |
t | Corynebacterium bovis | 98 | AF311436 |
u | Dermacoccus nishinomyaensis | 99 | X87757 |
v | Brachybacterium nesterenkovii | 99 | X91033 |
w | Corynebacterium variabilis | 99 | AJ222816 |
x | Corynebacterium variabilis | 100 | AJ222816 |
y | Corynebacterium afermentans | 99 | X82055 |
z | Corynebacterium flavescens | 98 | X84441 |
See Fig. 2.
That is, the percentage of identical nucleotides in the sequence retrieved from the clone and the sequence of the closest relative found in GenBank and the RDP database.