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. 2003 Aug;77(15):8524–8531. doi: 10.1128/JVI.77.15.8524-8531.2003

TABLE 1.

Comparison of the HIV-1 NC Zn2+ fingers with the seven Zn2+ fingers from human CNBP

Zn2+ finger Amino acida at position:
1 2 3 4 5 6 7 8 9 10 11 12 13 14
HIV-1 NH2 terminus Cys Phe Asn Cys Gly Lys Glu Gly His Ile Ala Lys Asn Cys
CNBP-1b - - Lys - - Arg Ser - - Trp - Arg Glu -
CNBP-2 - Tyr Arg - - Glu Ser - - Leu - - Asp -
CNBP-3 - Tyr - - - Arg Gly - - - - - Asp -
CNBP-4 - Tyr - - - - Pro - - Leu - Arg Asp -
CNBP-5 - Tyr Ser - - Glu Phe - - - Gln - Asp -
CNBP-6 - Tyr Arg - - Glu Thr - - Val - Ile - -
CNBP-7 - Tyr Arg - - Glu Ser - - Leu - Arg Glu -
HIV-1 COOH terminus - Trp Lys - - - - - - Gln Met - Asp -
a

The positions of the first amino acids of the HIV-1 NH2- and COOH-terminal NC Zn2+ fingers are 15 and 36, respectively. The positions of the first Cys residue in each of the seven human CNBP Zn2+ fingers are 6, 54, 74, 97, 119, 137, and 158 (45). A dash (-) indicates that the amino acid is the same as that found in the HIV-1 NH2-terminal NC Zn2+ finger.

b

The number after CNBP refers to the order of the Zn2+ finger from the NH2 terminus out of a total of seven Zn2+ fingers.