TABLE 1.
Zn2+ finger | Amino acida at position:
|
|||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | |
HIV-1 NH2 terminus | Cys | Phe | Asn | Cys | Gly | Lys | Glu | Gly | His | Ile | Ala | Lys | Asn | Cys |
CNBP-1b | - | - | Lys | - | - | Arg | Ser | - | - | Trp | - | Arg | Glu | - |
CNBP-2 | - | Tyr | Arg | - | - | Glu | Ser | - | - | Leu | - | - | Asp | - |
CNBP-3 | - | Tyr | - | - | - | Arg | Gly | - | - | - | - | - | Asp | - |
CNBP-4 | - | Tyr | - | - | - | - | Pro | - | - | Leu | - | Arg | Asp | - |
CNBP-5 | - | Tyr | Ser | - | - | Glu | Phe | - | - | - | Gln | - | Asp | - |
CNBP-6 | - | Tyr | Arg | - | - | Glu | Thr | - | - | Val | - | Ile | - | - |
CNBP-7 | - | Tyr | Arg | - | - | Glu | Ser | - | - | Leu | - | Arg | Glu | - |
HIV-1 COOH terminus | - | Trp | Lys | - | - | - | - | - | - | Gln | Met | - | Asp | - |
The positions of the first amino acids of the HIV-1 NH2- and COOH-terminal NC Zn2+ fingers are 15 and 36, respectively. The positions of the first Cys residue in each of the seven human CNBP Zn2+ fingers are 6, 54, 74, 97, 119, 137, and 158 (45). A dash (-) indicates that the amino acid is the same as that found in the HIV-1 NH2-terminal NC Zn2+ finger.
The number after CNBP refers to the order of the Zn2+ finger from the NH2 terminus out of a total of seven Zn2+ fingers.