Table 3. Nucleotide diversity in the intergenic regions.
| Intergenic region | Sequence, bp | No. of SNP | π (×10-4), mean±SE |
|---|---|---|---|
| 14045-14050 | 3,692 | 5 | 5.4±0.9 |
| 14050-14055 | 1,100 | 0 | 0.0 |
| 14055-14060 | 1,987 | 15 | 41.3±5.4 |
| 14060-14065 | 3,384 | 11 | 13.0±2.5 |
| 14065-14070 | 3,389 | 5 | 7.1±1.1 |
| 14070-14075 | 1,468 | 22 | 61.6±9.6 |
| 14075-14080 | 3,488 | 5 | 5.8±0.9 |
| 14080-14085 | 1,134 | 2 | 7.1±1.2 |
| 14085-14090 | 2,499 | 5 | 10.4±1.3 |
| 14090-14095 | 1,401 | 9 | 27.1±2.9 |
| 14095-14100 | 697 | 0 | 0.0 |
| 14100-14105 | 518 | 1 | 7.7±2.1 |
| 14105-14110 | 1,373 | 2 | 5.9±1.0 |
| 14110-14115 | 395 | 2 | 25.3±3.9 |
| 14115-14120 | 1,282 | 2 | 7.8±1.0 |
| 14120-14125 | 3,591 | 10 | 15.1±1.5 |
| 14125-14130 | 1,366 | 5 | 16.6±2.0 |
| 14130-14135 | 3,565 | 4 | 4.6±0.8 |
| 14135-14140 | 1,215 | 0 | 0.0 |
| 14140-14145 | 592 | 3 | 20.3±5.4 |
| 14145-14155* | 4,575 | 6 | 5.3±1.1 |
| 14155-14160 | 2,434 | 4 | 6.7±1.3 |
| 14160-14165 | 277 | 1 | 14.4±3.8 |
| 14165-14170 | 678 | 1 | 5.9±1.6 |
π was estimated as described in Methods
*
Two intergenic regions flanking the csp gene (14150c)