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. Author manuscript; available in PMC: 2006 Nov 29.
Published in final edited form as: J Mol Biol. 2006 Aug 26;363(4):813–822. doi: 10.1016/j.jmb.2006.08.057

Table 1.

Statistics for the 20 CXCL14 conformers.

Experimental constraints
Distance constraints
 Long 209
 Medium [1<(i–j)≤5] 133
 Sequential [(i–j)=1] 186
 Intraresidue [i=j] 366
 Total 894
Dihedral angle constraints (φ and ψ) 97
Average atomic R.M.S.D. to the mean structure (Å)
Residues 13-40, 49-73
 Backbone (Cα, C′, N) 0.49 ± 0.08
 Heavy atoms 1.00 ± 0.11
Deviations from idealized covalent geometry
 Bond lengths RMSD (Å) 0.015
 Torsion angle violations RMSD (°) 1.4
WHATCHECK quality indicators
 Z-score −2.83 ± 0.40
 RMS Z-score
  Bond lengths 0.74 ± 0.02
  Bond angles 0.79 ± 0.03
 Bumps 0 ± 0
Lennard-Jones energya (kJ mol−1) −1,690 ± 61
Constraint violations
 NOE distance Number > 0.5 Å 0 ± 0
 NOE distance RMSD (Å) 0.024 ± 0.002
 Torsion angle violations Number > 5 ° 0.3 ± 0.66
 Torsion angle violations RMSD (°) 0.958 ± 0.192
Ramachandran statistics (% of all residues)
 Most favored 84.3 ± 3.6
 Additionally allowed 10.1 ± 3.2
 Generously allowed 3.2 ± 1.7
 Disallowed 2.4 ± 2.1
a

Nonbonded energy was calculated in XPLOR-NIH.