Table IV.
Identification of auxin-independent and ripening-regulated genes and processes in strawberry
| PRI Clone | R:Aa | Homolog Definition (GenBank Accession No.) (E Value)b | Putative Process |
|---|---|---|---|
| A145 | n.d. | Unknown (AL138641) (7e-49) | Unknown |
| B1 | 6.0 | Aldo keto reductase (AC002292) (5e-14) | Unknown |
| B73 | n.d. | Protein kinase (AC009325) (1e-33) | Signal transduction |
| B85 | n.d. | Myo-inositol-1-phosphate synthase (U38920) (4e-60) | Stress |
| B109 | 13.1 | Adenosine kinase (AJ012281) (3e-79) | Primary metabolism |
| C54 | 6.9 | Stearoyl-acyl carrier protein desaturase (X56508) (9e-49) | Fatty acid metabolism |
| C94 | n.d. | HMGR (L10390) (3e-59) | Primary metabolism |
| C112 | 6.0 | Ascorbate peroxidase (AF022213) (2e-51) | Stress |
| D5 | 2.4 | Dehydrin (U69633) (2e-13) | Stress |
| D15 | 4.9 | Polygalacturonase precursor (U20431) (1e-19) | Cell wall |
| D120 | 14.1 | Globulin-like protein (AF206627) (9e-24) | Unknown |
| D135 | 2.6 | Unknown (AP002031) (3e-35) | Unknown |
| F22 | 12.5 | Expansin (AF159563) (4e-54) | Cell wall |
| F93 | 3.7 | Pro-rich protein (AF026382) (2e-34) | Cell wall |
| G128 | 4.7 | Inorganic pyrophosphatase (AF093629) (3e-25) | Primary metabolism |
| G144 | n.d. | Short chain alcohol dehydrogenase (AC009273) (9e-29) | Stress |
| H78 | 11.0 | Annexin (AF188832) (3e-59) | Stress |
| H168 | 2.4 | Unknown (AF325033) (9e-20) | Unknown |
| H182 | 6.2 | Ubiquitin (X98063) (3e-51) | Stress |
a
Expression ratio in microarray experiment (IV) comparing expression in receptacle (R) versus achenes (A). n.d., No difference in expression between achene and receptacle.
b
Definition, accession no. (nucleotide sequence), and E value (see Altschul et al., 1990) of the first BLAST X homolog.