Table III.
Gene | Accession No.a | Coded Proteinb | Reference | Regulationc | Blanco
Expressiond
|
|
---|---|---|---|---|---|---|
Control | Al stressed | |||||
Wali 1 | L11879 | MT class I | Snowden and Gardner (1993) | Up (24 h) | 8 | 15 |
Wali 2 | L11880 | Cys-rich protein | Snowden and Gardner (1993) | Up (0.5 h) | 0 | 0 |
Wali 3 | L11881 | Proteinase inhibitor | Snowden and Gardner (1993) | Up (24 h) | 0 | 0 |
Wali 4 | L11883 | Phe-ammonia lyase | Snowden and Gardner (1993) | Up (24 h) | 0 | 2 |
Wali 5 | L11883 | Proteinase inhibitor | Snowden and Gardner (1993) | Up (24 h) | 5 | 25 |
Wali 6 | L28009 | Proteinase inhibitor | Richards et al. (1994) | Up (24 h) | 2 | 4 |
Wali 7 | L28008 | Unknown | Richards et al. (1994) | Up (24 h) | 0 | 1 |
Shh | L11782 | S-adenosyl-l-homo-Cys hydrolase | Richards and Gardner (1994) | Up/down | 0 | 0 |
H3 | X00937 | Histone H3 | Richards and Gardner (1994) | Up/down | 1 | 5 |
H4 | X00043 | Histone H4 | Richards and Gardner (1994) | Up/down | 0 | 3 |
Hsp70 | X13301 | Heat shock protein 70 | Richards and Gardner (1994) | Down (4 h) | 4 | 1 |
PAL111 | NP | Auxin-regulated protein | Ezaki et al. (1995) | Up (10 h) | 0 | 0 |
PAL142 | D29680 | Glutathione S-transferase | Ezaki et al. (1995) | Up (10 h) | 2 | 5 |
PAL139 | D29679 | Cys-rich domain protein | Ezaki et al. (1995) | Up (10 h) | 0 | 0 |
PAL141 | D29681 | Unknown | Ezaki et al. (1995) | Up (10 h) | 0 | 0 |
PAL 201 | D45891 | Anionic peroxidase | Ezaki et al. (1996) | Up (10 h) | 0 | 0 |
GDI | AF012823 | GDP-dissociation inhibitor | Ezaki et al. (1997) | Up | 1 | 0 |
Glc1 | U30323 | β -1,3-Glucanase | Ortega et al. (1997) | Up (6 h) | 0 | 0 |
Wfim1 | U67717 | Cytoskeletal fimbrin-like | Ortega et al. (1997) | Up (12 h) | 0 | 0 |
Sali3-2 | U89693 | Auxin down-regulated ADR6 | Ragland and Soliman (1997) | Up | 0 | 0 |
Sali5-4a | U64866 | Auxin down-regulated ADR6 | Ragland and Soliman (1997) | Up | 0 | 0 |
RicMT | U77294 | MT class II | Yu et al. (1998) | Down (24 h) | 0 | 0 |
War 5.2 | AF005088 | Cys proteinase | Hamel et al. (1998) | Up (24 h) | 1 | 1 |
War 13.2 | AF005084 | Oxalate oxidase | Hamel et al. (1998) | Up (24 h) | 0 | 7 |
pEARLI8 | NP | Phototropic response transducer | Richards et al. (1998) | Up/down | 0 | 0 |
pEARLI1 | L43080 | Pro-rich hydrophobic protein | Richards et al. (1998) | Up/down | 0 | 1 |
pEARLI2 | NP | Unknown | Richards et al. (1998) | Up/down | 0 | 0 |
ALD | T43001 | Aldolase (chloroplast) | Richards et al. (1998) | Up/down | 0 | 0 |
pEARLI4 | L43081 | Pro-rich hydrophilic protein | Richards et al. (1998) | Up/down | 0 | 1 |
pEARLI5 | NP | Berberine bridge enzyme | Richards et al. (1998) | Up (2 h) | 1 | 1 |
BCB | Z15058 | Blue copper-binding protein | Richards et al. (1998) | Up (2 h) | 0 | 0 |
PER | X71794 | Peroxidase | Richards et al. (1998) | Up (1 h) | 0 | 0 |
ALA | T41718 | Ala aminotransferase | Richards et al. (1998) | Down (4 h) | 0 | 0 |
CAB | X64459 | Chlorophyll a/b-binding protein | Richards et al. (1998) | Down (4 h) | 0 | 0 |
CZSOD | T04184 | Cu/Zn superoxide dismutase | Richards et al. (1998) | Up (8 h) | 1 | 2 |
CAT | X64271 | Catalase | Richards et al. (1998) | Down (2 h) | 1 | 0 |
Sad | AF053638 | Alcohol dehydrogenase (short-chain) | Brosché and Strid (1999) | Up (6 h) | 0 | 0 |
PU1 | X17020 | Polyubiquitin | Brosché and Strid (1999) | Up (6 h) | 2 | 4 |
Chs | X63333 | Chalcone synthase | Brosché and Strid (1999) | Up (6 h) | 0 | 0 |
Psdrr230 | AF139018 | Disease resistance protein 230 | Sävenstrand et al. (2000) | Up (24 h) | 0 | 0 |
PsLRRP | AF137354 | Leu-rich repeat protein | Sävenstrand et al. (2000) | Up (3 h) | 0 | 1 |
PsExt | AF155232 | Extensin | Sävenstrand et al. (2000) | Up (3 h) | 0 | 0 |
VATPase | L11873 | Vacuolar ATPase | Hamilton et al. (2001) | Up (48 h) | 0 | 0 |
Ef2 | AF005085 | Elongation factor-2 | Hamel et al. (unpublished data) | Down | 0 | 0 |
Zmal1 | AF031083 | Unknown | Menossi et al. (unpublished data) | Up | 0 | 0 |
Accession nos. of the probes used in each study. NP, The accession no. was not provided in the study.
Coded protein indicates the putative function of the gene product expected by sequence homologies.
Regulation indicates the expression profiles from northern-blot analysis (for more details, see reference).
Blanco expression shows the no. of copies of highly homologous ESTs in Blanco cDNA libraries.