TABLE 3.
Identifying sequences of tilapia, cichlids, and other fish species in public databases (human proteins vs. translated teleost sequences)
| Gene | Accession nos. | Species | Database | E-value | Identity (%) | Similarity (%) |
|---|---|---|---|---|---|---|
| Amh | ONI06JC.39_H08 | O. niloticus | RBEST | 3.0e-06 | 29 (35/117) | 41 (48/117) |
| Dax1 | AY135397 | O. niloticus | NCBI | 4.0e-54 | 46 (126/269) | 63 (170/269) |
| Dmrt2 | AY149606 | O. niloticus | NCBI | 9.0e-46 | 78 (85/108) | 86 (93/108) |
| Dmrta2 | AY149605 | O. niloticus | NCBI | 2.0e-39 | 72 (78/108) | 77 (84/108) |
| Fhl2(Fhl3l) | ONI05DB.39_H04 | O. niloticus | RBEST | 1.0e-104 | 54 (164/299) | 68 (204/299) |
| Foxl2 | AY554172 | O. niloticus | NCBI | 9.0e-70 | 62 (178/286) | 67 (192/286) |
| Ixl | TC1294 | Haplochromis | TIGR | 1.1e-50 | 73 (99/135) | 84 (114/135) |
| Lhx9 | AY534647 | O. latipes | NCBI | 1.0e-110 | 90 (208/229) | 95 (219/229) |
| BC093258 | D. rerio | 4.0e-161 | 90 (287/317) | 95 (302/317) | ||
| otCYP19 | AF472620 | O. niloticus | NCBI | 2.0e-147 | 52 (243/466) | 73 (341/466) |
| Sf1 | AB060814 | O. niloticus | NCBI | 9.0e-133 | 58 (277/474) | 70 (335/474) |
| Sox8 | AY935980 | T. rubripes | NCBI | 2.0e-76 | 61 (217/352) | 71 (252/352) |
| DQ294028 | S. salar | 3.0e-66 | 59 (203/339) | 67 (229/339) |