TABLE 6.
Maximum-composite-likelihood analysis of exon 2–5 and exon 6–9 sequences without and with gene conversion models
| Region | L (bp) | f |  |
|---|---|---|---|
| Exons 2–5 | — | 0 | −722.33 |
| 50 | 0.1 | −722.74 | |
| 100 | 0.1 | −722.91 | |
| 500 | 0.1 | −722.67 | |
| Exons 6–9 | — | 0 | −2955.35 |
| 50 | 0.1 | −2955.46 | |
| 100 | 0.1 | −2955.41 | |
| 500 | 0.1 | −2955.38 |
Models of crossing over without (f = 0; no track length, L) and with gene conversion (f > 0; L = 50, 100, 500 bp) were applied. f-values that maximize the composite likelihood are shown. Polymorphic sites with more than two alleles were ignored in the analysis.