TABLE 2.
p[GT1] insertion lines with aberrant olfactory avoidance behavior
Mutational effects
|
P-values from ANOVA
|
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MASa
|
a/σpb
|
Sexes pooledc
|
Sexes separate
|
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Line | Candidate gene | Cytological location | p[GT1] insertion site | ♀ | ♂ | ♀ | ♂ | S | L | L × S | L♀ | L♂ |
BG01883 (A) | ftz transcription factor 1 | 75D8-E1 | In intron 1 | 3.6 | 3.71 | 1.01 | 0.72 | NS | **** | NS | *** | NS |
BG01918 (A) | Phosphoglycerate kinase | 23A3 | 1.8 kb upstream of exon1 | 2.89 | 3.45 | 1.75 | 1.02 | NS | **** | NS | ** | * |
BG00386 (B) | NMDA receptor 1 | 83A6-7 | 302 bp downstream of 3′ region | 4.15 | 3.82 | 0.21 | 0.34 | NS | * | NS | NS | * |
BG01037 (B) | βν integrin | 39A1 | 133 bp in exon 1 | 3.93 | 3.92 | 0.44 | 0.27 | NS | ** | NS | * | NS |
BG01047 (B) | frizzled | 70D4-5 | 100 bp in exon 1 | 3.84 | 4.53 | 0.53 | −0.17 | NS | NS | ** | ** | NS |
BG01214 (B) | sugarless/CG10064 | 65D4-5 | 275 bp upstream of exon 1 | 3.91 | 3.86 | 0.45 | 0.30 | NS | *** | NS | ** | * |
BG01244 (B) | couch potato | 90D1-E1 | In intron 2 | 3.88 | 4.06 | 0.49 | 0.17 | NS | * | NS | ** | NS |
BG01245 (B) | Sema-5c | 68F2 | 197 bp upstream of exon 1 | 2.97 | 3.41 | 1.42 | 0.63 | NS | ***** | NS | *** | *** |
BG01279 (B) | CG17836 | 91D4-5 | In intron 3 | 4.16 | 3.68 | 0.20 | 0.44 | NS | ** | NS | NS | ** |
BG01295 (B) | SRY interacting protein 1 | 54B6-7 | 17 bp in exon 1 | 3.48 | 4.13 | 0.90 | 0.12 | NS | *** | * | *** | NS |
BG01416 (B) | bicoid-interacting protein 3 | 42A13-14 | In intron 1 | 4.36 | 3.65 | −0.00 | 0.47 | NS | * | * | NS | ** |
BG01533 (B) | No predicted gene | 67E7 | 4.32 | 3.56 | 0.04 | 0.53 | NS | ** | * | NS | ** | |
BG01543 (B) | Merlin | 18E1 | In exon 1 | 3.22 | 3.19 | 1.17 | 0.79 | NS | ***** | NS | *** | *** |
BG01563 (B) | CG16708 | 82F11-83A1 | 109 bp upstream of exon 1 | 3.71 | 3.88 | 0.66 | 0.30 | NS | ***** | NS | *** | *** |
BG01564 (B) | CG14430 | 6E4 | 0.5 kb upstream of exon 1 | 2.97 | 3.14 | 1.42 | 0.83 | NS | ***** | NS | *** | *** |
BG01596 (B) | CG13377 | 1A1 | 317 bp upstream of exon 1 | 4.24 | 3.70 | 0.12 | 0.42 | NS | * | NS | NS | ** |
BG01672 (B) | CG14591/SCAP | 42A8 | 27 bp in exon 5 | 3.19 | 3.67 | 1.20 | 0.45 | NS | ***** | NS | *** | * |
BG01686 (B) | 1.28 | 42B3 | 265 bp upstream of exon 1 | 3.48 | 3.60 | 0.90 | 0.49 | NS | ***** | NS | *** | ** |
BG01693 (B) | CG10777/CG10778 | 7C3-4 | 25 bp in exon1/1.9 kb downstream of 3′ region | 3.48 | 3.85 | 0.90 | 0.32 | NS | **** | NS | *** | * |
BG01803 (B) | 1.28 | 42B3 | 265 bp upstream of exon 1 | 3.89 | 3.43 | 0.48 | 0.62 | NS | **** | NS | ** | ** |
BG01909 (B) | CG14035 | 25C6 | 3.7 kb downstream of 3′ region | 3.65 | 3.13 | 0.72 | 0.83 | NS | ***** | NS | *** | *** |
BG02022 (B) | CG6301 | 53D11 | 1.4 kb downstream of 3′ region | 3.22 | 2.71 | 1.17 | 1.14 | NS | ***** | NS | *** | *** |
BG02053 (B) | Sema-5c | 68F2 | 55 bp upstream of exon 1 | 1.07 | 1.66 | 3.01 | 1.73 | NS | ***** | NS | *** | *** |
BG02077 (B) | Rtnl1 | 25B9-C1 | In intron 1 | 3.68 | 2.76 | 0.69 | 1.10 | NS | ***** | ** | *** | *** |
BG02081 (B) | Rtnl1 | 25B9-C1 | In intron 1 | 3.23 | 2.78 | 1.16 | 1.09 | NS | ***** | NS | *** | *** |
BG02115 (B) | Calreticulin | 85E | 87 bp in exon1 | 3.76 | 3.49 | 0.60 | 0.58 | NS | ***** | NS | ** | ** |
BG02169 (B) | High mobility group protein D | 57F10 | 633 bp of transcription initiation site | 4.14 | 3.78 | 0.22 | 0.37 | NS | * | NS | NS | * |
BG02181 (B) | Glutamate dehydrogenase | 95C13-D1 | 126 bp 5′ of transcription initiation site | 3.93 | 3.85 | 0.43 | 0.32 | NS | ** | NS | * | * |
BG02200 (B) | CG6782/CG6783 | 86E10 | In intron 1 | 3.38 | 3.27 | 1.00 | 0.73 | NS | ***** | NS | *** | *** |
BG02206 (B) | lilliputian | 23C1-C3 | In intron 2 | 3.40 | 4.32 | 0.98 | −0.01 | NS | ** | *** | *** | NS |
BG02209 (B) | escargot | 35D2 | 321 bp upstream of exon 1 | 3.55 | 3.15 | 0.83 | 0.82 | NS | ***** | NS | *** | *** |
BG02251 (B) | innexin 2 | 6E4 | In intron 1 | 3.23 | 3.06 | 1.16 | 0.88 | NS | ***** | NS | *** | *** |
BG02314 (B) | 1.28 | 42B3 | 289 bp upstream of exon 1 | 3.82 | 3.61 | 0.55 | 0.49 | NS | **** | NS | ** | ** |
BG02320 (B) | Toll | 97D2 | 44 bp upstream of exon 1 | 3.78 | 3.51 | 0.59 | 0.57 | NS | **** | NS | ** | *** |
BG02326 (B) | CG13889 | 61D2 | 68 bp in exon 1 | 4.22 | 3.73 | 0.14 | 0.41 | NS | * | NS | NS | * |
BG02327 (B) | pipsqueak | 47A13-B1 | In intron 2 | 3.29 | 3.39 | 1.09 | 0.65 | NS | ***** | NS | *** | *** |
BG02348 (B) | Heat shock protein 23 | 67B3 | 298 bp upstream of exon 1 | 3.19 | 3.15 | 1.20 | 0.82 | NS | ***** | NS | *** | *** |
BG02354 (B) | escargot | 35D2 | 350 bp upstream of exon 1 | 3.43 | 3.11 | 0.95 | 0.85 | NS | ***** | NS | *** | *** |
BG02386 (B) | Sema-5c | 68F2 | 81 bp upstream of exon 1 | 3.55 | 2.81 | 0.83 | 1.06 | NS | ***** | * | *** | *** |
BG02391 (B) | neuralized | 85C2-3 | In intron 1 | 3.97 | 3.78 | 0.39 | 0.37 | NS | **** | NS | ** | ** |
BG02418 (B) | CG14509 | 98F13-99A1 | In intron 1, 6.8 kb from 5′ region | 3.99 | 3.93 | 0.38 | 0.26 | NS | * | NS | * | NS |
BG02439 (B) | CG32556 | 16B12-C1 | 324 bp upstream of exon 1 | 3.29 | 2.93 | 1.09 | 0.98 | NS | ***** | NS | *** | *** |
BG02470 (B) | CG8963 | 53 E4 | 80 bp in exon 1 | 3.37 | 3.20 | 1.01 | 0.79 | NS | ***** | NS | *** | *** |
BG02491 (B) | Ras-related protein | 3E5-6 | 4 kb upstream of exon 1 | 3.78 | 4.03 | 0.59 | 0.19 | NS | ** | NS | ** | NS |
BG02510 (B) | chameau | 27F3-4 | 2.9 kb upstream of exon 1 | 3.97 | 3.76 | 0.39 | 0.39 | NS | ** | NS | * | * |
BG02522 (B) | CG15816 | 16C1-C8 | 876 bp upstream of of exon 1 | 3.98 | 3.78 | 0.39 | 0.37 | NS | ** | NS | * | * |
BG02566 (B) | Calreticulin | 85E1 | 114 bp in exon 1 | 3.69 | 3.74 | 0.69 | 0.40 | NS | ***** | NS | *** | *** |
BG02601 (B) | CG14782/CG14781 | 2B1 | In intron 2/exon 1 | 3.85 | 3.54 | 0.51 | 0.54 | NS | ***** | NS | *** | *** |
BG02745 (B) | CG14411/CG14408 | 12F5 | In exon 1 | 3.96 | 3.88 | 0.40 | 0.30 | NS | *** | NS | ** | * |
BG01015 (F) | Moesin | 8B4-6 | In intron 1 | 3.97 | 4.00 | 0.41 | 0.33 | NS | *** | NS | * | * |
BG01707 (F) | CG6301 | 53D11 | 1.4 kb downstream of 3′ region | 3.76 | 4.39 | 0.73 | 0.09 | * | ** | * | *** | NS |
BG01084 (F) | CG9238 | 70E1-2 | 49 bp upstream of exon 1 | 4.06 | 3.66 | 0.37 | 0.90 | NS | **** | NS | * | ** |
BG01095 (F) | pointed/DNApolymarase E | 94E10-13 | 742 bp in exon 1 | 4.03 | 4.08 | 0.41 | 0.44 | NS | ** | NS | * | * |
BG01574 (F) | Sema-5c | 68F2 | 82 bp upstream of exon 1 | 3.93 | 4.11 | 0.53 | 0.40 | NS | ** | NS | * | * |
BG01796 (F) | Spinophilin | 62E4-5 | In intron 1 | 3.68 | 4.35 | 0.84 | 0.13 | * | ** | * | *** | NS |
Candidate genes used for analysis of epistasis are underlined. Letters in parentheses after the line name denote different co-isogenic Canton S host strains for the p[GT1]-element insertion. *P < 0.05, **P < 0.01, ***P < 0.001, ****P < 0.0001, *****P < 0.00001. P-values < 0.0001 exceed Bonferroni correction for multiple tests.
MAS, mean avoidance scores.
Standardized mutational effect (see text for explanation).
S and L denote the main cross-classified effects of sex and line, respectively, in the ANOVA of avoidance scores.