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. 2006 Nov;174(3):1565–1572. doi: 10.1534/genetics.106.062208

TABLE 2.

Quantitative trait loci for diabetes-associated traits identified by multiple-marker QTL analysis

QTL Marker ± SI (Mb)a Trait LRb Nominal P-value Effectc ± SE Vard % No. of genese
Niddm1i1 D1Rat83 + 0.8 Bw 11.0** 1 × 10−3 −6.8 ± 2.0 5.1 13
Niddm1i2 D1Swe2 ± 0.25 G15 8.5* 3 × 10−3 +2.4 ± 0.8 4.0 2
G30 4.1 0.04 +1.4 ± 0.7 2.0
Niddm1i3 D1Got244 ± 0.2 G15 8.3* 4 × 10−3 −2.6 ± 0.9 3.9 1
G30 4.3 0.04 −1.5 ± 0.7 2.1
Niddm1i4 D1Smu2 ± 0.35 G15 20.9*** 5 × 10−6 +2.2 ± 0.5 9.6 7
G30 15.6** 8 × 10−5 +1.5 ± 0.4 7.2

Bw, body weight (grams); G15, postprandial glucose at 15 min, and, G30 at 30 min in mmol/liter.

a

SI for QTL support intervals estimated by the 1.5-LOD drop method; Mb, megabase pair.

b

LR denotes the likelihood ratio test statistic for QTL and level of significance: *suggestive experiment-wise significance (α = 0.2); **significant experiment-wise significance (α = 0.05); ***highly significant experiment-wise significance (α = 0.001).

c

Additive effect defined as AA-BB/2, where AA is the genotypic value for GK homozygotes at the QTL, and BB is the genotypic value for F344 homozygotes; SE, standard error.

d

Var is percentage of phenotypic residual variance explained by the QTL.

e

The number of positional candidate genes within the QTL interval using NCBI assembly 3.4 of the rat genome.