Table II.
White lupin ESTs derived from a cDNA library of proteoid roots at 7 and 10 DAE were hybridized against first strand cDNA of different tissues
| EST Identification No. | GenBank Accession No. of EST | Accession No. of GenBank Hit | BLASTX E Value | Annotation | Possible Function | Ratio of
Expressiona
|
||||
|---|---|---|---|---|---|---|---|---|---|---|
| −P Proteoid Root/+P
Normal Root
|
Normal Root
|
Leaf
|
||||||||
| 10 DAE | 12 DAE | 14 DAE | −P/+P | −P/+P | ||||||
| E22, E99, E372 | CA410752, CA526338, CA526349 | AAC16012.1 | 9E-76 | Polyubiquitin | Here, serves as control | 1 ± 0.2 | 0.9 ± 0.2 | 1.3 ± 0.3 | 1 ± 0.2 | 1 ± 0.2 |
| E170, E292, E304 | CA526339, CA411008, CA411018 | Q9SJQ9 | 4E-47 | Fru-1,6-bisP aldolase | Glycolysis | 1.7 ± 0.7 | 2.2 ± 0.9 | 2.5 ± 1.4 | 0.9 ± 0.4 | 1.1 ± 0.3 |
| E100, E111, E147, E440, E549, E625, E790 | CA410825, CA410836, CA410872, CA411147, CA411156, CA411327, CA411489 | Q9XG67 | 2E-62 | NAD-dependent glyceraldehyde-3P dehydrogenase | Glycolysis | 2.2 ± 0.8 | 2.2 ± 0.7 | 2.4 ± 0.8 | 1.3 ± 0.5 | 1.3 ± 0.4 |
| E241 | CA410959 | O42908 | 1E-62 | 2,3-Bisphosphoglycerate mutase | Glycolysis | 2.1 ± 0.2 | 3.7 ± 1.6 | 4.2 ± 1.2 | 1.3 ± 0.2 | 1.2 ± 0.7 |
| E18 | CA410748 | CAB75428.1 | 1E-68 | Enolase | Glycolysis | 1.7 ± 0.1 | 2.4 ± 0.1 | 2.4 ± 0.3 | 1.4 ± 0.1 | 1.1 ± 0.5 |
| E171, 447 | CA410895, CA411154 | AAL11502.1 | 5E-63 | Malate dehydrogenase | Glycolysis | 2.1 ± 0.2 | 2.4 ± 0.3 | 2.5 ± 0.4 | 1.5 ± 0.3 | 1.2 ± 0.8 |
| E112, E423, E677 | CA410837, CA411130, CA411379 | AF520576 | 5E-27 | Extensin-like protein | Cell wall structure protein | 2.3 ± 0.6 | 1.6 ± 0.6 | 1.3 ± 0.7 | 1.4 ± 0.3 | 1.3 ± 0.4 |
| E81, E757, E796 | CA410808, CA411457, CA411495 | BAB33421.1 | 2E-25 | Putative senescence-associated protein | Unknown | 2.1 ± 0.5 | 1.7 ± 0.8 | 2.2 ± 0.5 | 1.4 ± 0.4 | 0.8 ± 0.4 |
| E183 | CA410907 | NP_198080.1 | 5E-17 | Putative protein | Unknown | 4.4 ± 0.2 | 3.8 ± 0.9 | 1.4 ± 0.8 | 0.4 ± 0.3 | 1.3 ± 0.3 |
| E711 | CA411412 | No significant match | Unknown | 1.2 ± 0.2 | 1.6 ± 1.1 | 5.1 ± 0.6 | 4.9 ± 0.1 | 0.8 ± 0.1 | ||
Listed are ESTs that displayed induced expression in −P proteoid roots, compared to +P normal roots.
Values represent averages from two independent nylon filter arrays.