Table II.
Gene Name | Cyanobase Open Reading Frame Identification | Forward Primer (5′ → 3′) | Reverse Primer (5′ → 3′) |
---|---|---|---|
cmpA | slr0040 | CGAGCGATTGGGTAGATAA | TGGATTAGCAGGGTCAAAGG |
cmpB | slr0041 | CGGGTTGCTCAAGGTTATTC | CGCACCGATGTAAAACACTG |
orf576 | slr0042 | CCCTCTATCCCACCGAAAAT | TAGAGTCGCCTTCCGGATTA |
cmpC | slr0043 | TTAGGAGTGCGGGAAGATTG | TGGTGAAATTGCGATGAATG |
cmpD | slr0044 | CTTGGTTAACTGCCCTGGAA | TGGGCAAAGCGGTTATAGAG |
ndhF3 | slll732 | GTGAAGCTAAGCCGATGACC | AAAGGCGCCAATTAAAGTCA |
ndhD3 | sll1733 | CGGTACCGAGCTGAGTGTTT | TTCATTGGTGGTGGTTTGTG |
chpY | sll1734 | ACGGTATTTTTGCCATTGCT | ATTGCCGATTCTTAGCCAAA |
ndhF4 | sll0026 | GTGCCCATGGTGAGTTTGAT | CTGGACCAAAACTGCCTGAT |
ndhD4 | sll0027 | ATCATTTCTGCCCTGCTGTT | ACTTCCCCCAATTCCTTGAC |
chpX | slr1302 | TGTGGTGCAACATATCCAAGA | GTCTCCTGTTCCTGGGGATT |
ndhD1 | slr0331 | CATACCCTGATGCTGGATGA | GCCGTAAAGCAGTGACTTCC |
rbcX | slr0010 | GCACATAGCTCAGGCAACAG | GGGGGAGAATCGTTGTTGTT |
rbcL | slr0009 | CGGCATTTTGCTCCATATTC | AACTCAGGGGACCAACGAC |
rbcS | slr0012 | CTTACCTGCCCCCCTTTAACC | AGTAACGGCCTTGGTTTTGG |
ntpJ | slr1509 | CGGGCTTTAACACCATTGAT | CCAGCAAATTTTCCTCTGGA |
ccaA | slr1347 | GAGCCATGAAAGGTCTGCTC | ACGGGAGCCTCGATAAATG |
ictB | slr1515 | CCGTGGCGGTTATATTAGGT | AACAATGGCCACTAGCAACC |
ndhD2 | slr1291 | AGTAATGCCCACGGTTTTTG | AAGTCCGTGGTGGGAATGT |
ccmK3 | slr1838 | CCGTTGGCGTGATACAGAC | GAAGCGAGCGACTTTTTCTG |
ccmA | sll0934 | AGAAATCATTGCGGAAGTGG | GGCCAACGTCCTACAGTTTG |
ccmL | sll1030 | GGGACCGTGGTCAGTACATC | TCCCATCATCCCTCTTGTTG |
ccmM | sll1031 | AAGGCCAAATCCTGGGATAC | TTTAGCCGTGGGATCTATGC |
ccmO | slr1032 | ACAGCAACGGGGTTACAGTC | CTTCCACTATGGGCTTTTCC |
psbA2 | slr1311 | CTCTGATGGTATGCCCTTGG | TTGCGTTCGTGCATTACTTC |
sodB | slr1516 | GACTACACCGCTCTGGAACC | GGAAATCGGCAATGTAATCG |
cmpR | sll0030 | ACAAATTTTGGAGCGTTTGG | TGGAAACTGCTTCATCATGG |
ndhR | sll0998 | ATCCCGGCATTGAAGTATCC | TGGGTAATCACCGACAGTTG |
sbtA | slr1512 | TAATCGGGTCAAAATCTGGC | CAAAATCGTCAATAGCGGCG |
Cyanobase Web site: http://www.kazusa.or.jp/cyano/Synechocystis/index.html.