. 2006 Dec;142(4):1603–1620. doi: 10.1104/pp.106.086231

Table IV.

Proteins responding to T3Es

A change in spot density is classified as T3E if the DC3000 inoculation was significantly different from the DC3000 hrpA inoculation regardless of the other two treatments. A protein spot is classified as T3E and modulated by AvrRpm1 if the DC3000 inoculation was significantly different from the DC3000 (avrRpm1) treatment and DC3000 was significantly different from DC3000 hrpA.

Gene	Protein^a	Fraction Time^b	Spot Density^c
Gene	Protein^a	Fraction Time^b				Mg	hrpA	DC3000	avrRpm1
Proteins increasing in spot density		hpi
At3g01480	Putative thylakoid lumen rotamase (cyclophilin)	Sol 1.5	1,360^a ^b	872^a	2,167^b	1,576^a ^b
At5g19510	Elongation factor-1B α-subunit	Sol 1.5	1,454^a ^b	1,238^a	1,613^b	1,110^a ^b
At1g20980	SPB-like 2	Sol 3	448^a	449^a	630^b	528^a ^b
At1g32060	PRK	Sol 3	3,517^a ^b	2,058^a	3,528^b	2,808^a ^b
At1g20020	FNR	Sol 6	728^a ^b	397^a	657^b
At4g32260	H⁺-ATPase-like protein	Cpl 6	1,723^a ^b	425^a	1,566^b
Proteins decreasing in spot density
At2g39730	Rubisco activase	Sol 4	3,308^a ^b	3,728^a	2,118^b	2,547^b
At2g37660	3-β-Hydroxysteroid dehydrogenase/isomerase	Sol 6	1,096^a ^b	1,784^a	1,162^b
At3g04790	Rib-5-P isomerase	Sol 6	4,194^a ^b	5,846^a	3,347^b
Protein increasing in spot density modified by RPM1/AvrRpm1
At3g16640	TCTP homolog	Sol 1.5	1,176^a ^b	704^a	1,178^b	637^a
At5g10450	14-3-3-like protein AFT1	Sol 1.5	459^a	413^a	900^b	541^a
At5g09650	Inorganic pyrophosphatase-like protein	Sol 3	697^a ^b	498^a	893^b	642^a
Protein decreasing in spot density modified by RPM1/AvrRpm1
At5g66570	OEC33 K protein	Cpl 1.5	12,512^a ^b	10,150^a	6,614^b	11,780^a

Proteins are sorted by fraction, time after inoculation, and modulation by T3Es.

Subcellular fraction from which the protein was recovered. sol, Soluble; cpl, chloroplast; mit, mitochondria enriched. Time (hpi) at which the significant change was determined.

Averaged spot density over three replicates. Significant differences (labeled a, b) were determined by t test (P ≤ 0.05). Mg, 10 mM MgCl₂ treatment; hrpA, DC3000 hrpA treated; D3000, DC3000 treated; avrRpm1, DC3000 (avrRpm1) treated.