TABLE 2.
Genotype | Isolate(s) | Diversity (%)a
|
|||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
IIa
|
IIb, C12 | IIc, GI1 | Ia1, HJ3 | Ia2, HN6 | Ib, HI2 | Ie, HJ2 | |||||
CKJ7 | CNJ1 | CGJ2 | HJ1 | ||||||||
IIa | CKJ1, -3, -7 | 00.0 | 0.59 | 0.29 | 0.59 | 1.20 | 24.4 | 27.3 | 28.2 | 32.8 | 37.4 |
CNJ1 | 0.59 | 00.0 | 0.29 | 0.59 | 1.20 | 24.5 | 27.4 | 28.3 | 33.0 | 37.6 | |
CGJ2, CGJ5 | 0.11 | 0.11 | 00.0 | 0.29 | 0.89 | 23.9 | 26.8 | 27.8 | 32.4 | 36.9 | |
HJ1 | 0.23 | 0.23 | 0.11 | 00.0 | 1.20 | 24.1 | 27.3 | 28.2 | 32.8 | 37.1 | |
IIb | CI2, CI8 | 0.57 | 0.57 | 0.46 | 0.57 | 00.0 | 25.1 | 27.3 | 28.2 | 33.3 | 37.6 |
IIc | GI1 | 16.7 | 16.7 | 16.6 | 16.6 | 17.1 | 00.0 | 28.9 | 29.9 | 28.4 | 34.6 |
Ia1 | HJ3 | 17.3 | 17.3 | 17.2 | 17.3 | 17.5 | 18.2 | 00.0 | 0.29 | 38.9 | 45.0 |
Ia2 | HN4, HN6 | 18.0 | 18.0 | 17.9 | 18.0 | 18.2 | 18.6 | 0.22 | 00.0 | 38.4 | 45.2 |
Ib | HI1, HI2 | 22.5 | 22.5 | 22.3 | 22.5 | 23.3 | 17.3 | 24.8 | 24.0 | 00.0 | 20.8 |
Ie | HJ2 | 26.7 | 26.7 | 26.5 | 26.5 | 27.2 | 22.2 | 31.0 | 30.2 | 14.6 | 00.0 |
The lower left half is DNA diversities. The upper right half is amino acid diversities.