Table 2.
H. pylori strain | Designation of endonuclease | Recognition site | Isoschizomer | Units of activity/g cells |
---|---|---|---|---|
60190 | HpyII | GAAGA | MboII | 1.7 × 102 |
HpyIV | GANTC | HinfI | 5.2 × 102 | |
HpyV | TCGA | TaqI | 1.8 × 103 | |
HpyVIII | CCGG | HpaII | 2.3 × 102 | |
J178 | Hpy178II | GAAGA | MboII | 2.3 × 10 |
Hpy178III | TCNNGA | None | 1.5 × 102 | |
Hpy178VI | GGATG | FokI | 2.3 × 102 | |
Hpy178VII | GGCC | HaeIII | 2.8 × 103 | |
J188 | Hpy188I* | TCNGA | None | 1.3 × 103 |
Hpy188III | TCNNGA | Hpy178III | 6.2 × 10 | |
J99 | Hpy99I | CGWCG | None | 1.6 × 10 |
Hpy99II | GTSAC | Tsp45 I | 8.0 × 102 | |
Hpy99III | GCGC | HhaI | 2.9 × 103 | |
CH4 | HpyCH4I | CATG | NlaIII | 1.4 × 102 |
HpyCH4II | CTNAG | DdeI | 1.6 × 102 | |
HpyCH4III | ACNGT | Tsp4CI | 1.4 × 103 | |
HpyCH4IV | ACGT | MaeII | 3.1 × 10 | |
HpyCH4V | TGCA | CviRI | 2.1 × 102 | |
HpyCH4VI | TCNNGA | Hpy178III | 4.5 × 10 | |
J166 | Hpy166I | TCNGA | Hpy188I | 2.4 × 103 |
Hpy166II | GTNNAC | MjaIV | 7.3 | |
Hpy166III | CCTC | MnlI | 5.4 |
Enzymes with new specificities are written in bold.
Purification and cloning of this restriction system are described in ref. 21.