Table 2.

A performance appraisal of Bhageerath web server for 50 small globular proteins

Sl. No.	PDB ID (i)	Number of amino acids (ii)	Number of secondary structure elements (iii)	Number of structures accepted after Persistence length and Radius of gyration filters (iv)	Lowest RMSD in the final 100 structures (Å) (v)	Energy Rank of the lowest RMSD structure in 100 structures (vi)	After ProRegIn filter			After topology and accessible surface area filter
							Number of structures selected (Number of structures <6 Å) (vii)	Lowest RMSD (Å) (viii)	Energy Rank of the lowest RMSD structure in 100 structures (ix)	Number of structures selected (Number of structures <6 Å) (x)	Lowest RMSD (Å) (xi)	Energy Rank of the lowest RMSD structure in 10 structures (xii)
1	1E0Q	17	2E	128	2.5	2	100 (29)	2.5	2	10 (10)	2.5	2
2	1B03	18	2E	64	4.4	2	64 (5)	4.4	2	10 (5)	4.4	2
3	1WQC	26	2H	128	2.5	6	100 (53)	2.5	6	10 (10)	2.5	3
4	1RJU	36	2H	64	4.6	48	64 (3)	4.6	48	10 (2)	5.9	6
5	1EDM	39	2E	128	2.9	100	100 (59)	2.9	100	10 (10)	3.5	2
6	1AB1	46	2H	128	2.4	10	100 (82)	2.4	10	10 (10)	2.9	6
7	1BX7	51	2E	128	2.2	71	100 (85)	2.2	71	10 (10)	3.1	8
8	1B6Q	56	2H	128	3.1	27	100 (8)	3.1	27	10 (5)	3.1	10
9	1ROP	56	2H	128	4.3	2	100 (6)	4.3	2	10 (2)	4.3	2
10	1NKD	59	2H	128	3.8	8	100 (4)	3.8	8	10 (4)	3.8	6
11	1RPO	61	2H	128	3.8	2	100 (6)	3.8	2	10 (4)	3.8	2
12	1QR8	68	2H	128	4.4	80	100 (3)	4.4	80	10 (2)	4.4	10
13	1FME	28	1H,2E	15 592	2.9	52	100 (90)	2.9	52	10 (8)	3.7	5
14	1ACW	29	1H,2E	15 726	3.9	97	100 (45)	3.9	97	10 (5)	5.1	8
15	1DFN	30	3E	13 174	4.4	77	98 (11)	4.4	77	10 (4)	5.0	1
16	1Q2K	31	1H,2E	16 020	4.2	46	100 (20)	4.2	46	10 (4)	4.2	9
17	1SCY	31	1H,2E	15 423	3.1	10	100 (40)	3.1	10	10 (4)	3.1	5
18	1XRX	34	1E,2H	14 630	3.9	28	100 (19)	3.9	28	10 (1)	5.6	1
19	1ROO	35	3H	1071	2.5	14	100 (100)	2.5	14	10 (10)	2.8	5
20	1YRF	35	3H	15 180	3.8	16	100 (62)	3.8	16	10 (9)	4.8	4
21	1YRI	35	3H	15 180	2.8	81	100 (70)	2.8	81	10 (8)	3.8	6
22	1VII	36	3H	16 380	3.7	7	100 (50)	3.7	7	10 (6)	3.7	2
23	1BGK	37	3H	14 139	3.8	33	100 (56)	3.8	33	10 (8)	4.1	3
24	1BHI	38	1H,2E	14 923	5.3	2	100 (5)	5.3	2	10 (2)	5.3	2
25	1OVX	38	1H,2E	12 074	3.2	8	100 (76)	3.2	8	10 (5)	4.0	1
26	1I6C	39	3E	2927	4.1	31	100 (32)	4.1	31	10 (3)	5.1	2
27	2ERL	40	3H	16 268	3.1	18	100 (32)	3.1	18	10 (2)	3.2	6
28	1RES	43	3H	16 135	4.0	30	100 (40)	4.0	30	10 (7)	4.2	2
29	2CPG	43	1E,2H	10 905	3.6	20	100 (18)	3.6	20	10 (1)	5.3	2
30	1DV0	45	3H	14 488	4.0	20	100 (21)	4.0	20	10 (1)	5.1	4
31	1IRQ	48	1E,2H	11 592	3.5	74	100 (18)	3.5	74	10 (1)	5.3	9
32	1GUU	50	3H	13 410	4.5	74	100 (42)	4.5	74	10 (7)	4.6	6
33	1GV5	52	3H	11 109	3.5	33	99 (24)	3.5	33	10 (5)	4.1	2
34	1GVD	52	3H	10 626	3.8	18	100 (35)	3.8	18	10 (6)	4.9	9
35	1MBH	52	3H	10 632	3.8	48	100 (24)	3.8	48	10 (5)	4.0	4
36	1GAB	53	3H	14 495	3.6	16	100 (12)	3.6	16	10 (3)	3.6	6
37	1MOF	53	3H	16 384	2.4	57	100 (96)	2.4	57	10 (10)	2.9	5
38	1ENH	54	3H	13 622	3.2	12	100 (23)	3.2	12	10 (3)	4.6	3
39	1IDY	54	3H	11 133	3.3	84	100 (52)	3.3	84	10 (8)	3.5	6
40	1PRV	56	3H	5468	4.4	55	99 (25)	4.4	55	10 (7)	4.9	9
41	1HDD	57	3H	12 849	3.2	74	100 (22)	3.2	74	10 (2)	4.8	8
42	1BDC	60	3H	11 255	4.2	44	100 (19)	4.2	44	10 (2)	4.8	5
43	1I5X	61	3H	16 384	2.6	29	99 (54)	2.6	29	10 (10)	2.6	6
44	1I5Y	61	3H	16 384	2.6	20	100 (48)	2.6	20	10 (10)	2.6	7
45	1KU3	61	3H	5701	4.9	68	100 (14)	4.9	68	10 (3)	5.5	4
46	1YIB	61	3H	16 384	2.9	7	100 (75)	2.9	7	10 (9)	3.5	5
47	1AHO	64	1H,2E	2429	4.7	58	100 (15)	4.7	58	10 (1)	6.0	6
48	1DF5	68	3H	16 384	3.1	10	100 (41)	3.1	10	10 (6)	3.1	8
49	1QR9	68	3H	16 384	2.9	49	100 (33)	2.9	49	10 (9)	3.8	2
50	1AIL	70	3H	16 384	4.2	42	100 (5)	4.2	42	10 (3)	4.2	7