TABLE 1.
Identified genes related to transformability
Gene category | Gene name | bp |
---|---|---|
Competencya | comFc | 435 |
comE | 510 | |
comC | 4,353 | |
comB | 969 | |
smf | 1,152 | |
comM | 1,488 | |
pilD | 861 | |
pilC | 1,227 | |
pilB | 1,740 | |
pilU | 1,152 | |
pilT | 1,035 | |
comL | 1,056 | |
comFd | 642 | |
comP | 444 | |
comA | 2,379 | |
Recombinationb | recA | 1,050 |
recB | 3,705 | |
recC | 3,666 | |
recD | 1,779 | |
recG | 2,061 | |
recJ | 1,707 | |
recN | 1,662 | |
recO | 711 | |
ruvA | 615 | |
ruvB | 1,005 | |
ruvC | 576 | |
pepA | 1,449 | |
xerD | 918 | |
xerC | 918 | |
himD | 306 | |
himA | 732 | |
ssb | 579 | |
polA | 2,763 | |
ligA | 2,031 | |
gyrB | 2,469 | |
gyrA | 2,730 |
Recombination-associated genes are those present in the A. baylyi genome of those listed previously (38) and genes listed as recombination associated (3).
comF (ACIAD3314) is part of the comFECB operon (7) that was disrupted in this study.
comF (ACIAD3236) is a homologue of Haemophilus influenzae comF (3).