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. 2006 Nov;44(11):4101–4112. doi: 10.1128/JCM.01196-06

TABLE 4.

Nucleotide and amino acid sequence comparison of the VP4 of the KJ44 and KJ75 strains with the VP4 of the other P genotypes

Strain P type Origin % Identity with straina:
KJ44
KJ75
nt aa nt aa
BRV033 P[1] Bovine 90.4 91.7 66.3 64.5
NCDV P[1] Bovine 96.7 96.2 67.6 67.8
PTRV P[1] Simian 94.4 93.6 66.0 63.9
SA11 P[2] Simian 74.5 76.3 67.9 66.4
RRV P[3] Simian 74.3 78.4 67.3 67.1
RV-5 P[4] Human 67.4 60.2 64.4 59.5
CJN-M P[5] Bovine 67.5 67.4 95.3 96.2
P343 P[5] Porcine 67.6 64.8 92.0 91.9
UK P[5] Bovine 65.7 67.4 89.8 92.4
VMRI P[5] Bovine 67.6 67.8 95.2 96.9
Gottfried P[6] Porcine 67.1 62.5 63.2 58.7
OSU P[7] Porcine 71.9 76.3 64.3 61.3
Wa P[8] Human 66.3 60.9 64.2 58.9
K8 P[9] Human 65.1 64.0 66.2 58.2
69M P[10] Human 71.3 72.6 65.7 67.8
KK3 P[11] Bovine 56.7 42. 54.5 41.0
FI23 P[12] Equine 71.8 71.5 65.5 66.4
MDR13 P[13] Porcine 68.6 64.0 65.4 57.5
MC35 P[14] Human 65.2 64.0 62.5 57.5
Lp14 P[15] Ovine 72.5 76.3 67.3 69.1
Eb P[16] Murine 63.8 59.5 61.2 54.4
993/83 P[17] Bovine 59.4 44.1 56.2 39.7
L338 P[18] Equine 75.6 77.0 67.6 66.0
MC345 P[19] Human 66.3 62.5 64.1 59.4
EHP P[20] Murine 68.3 71.5 63.7 64.0
Hg18 P[21] Bovine 70.1 67.4 65.3 61.3
160/01 P[22] Lapin 67.0 61.9 65.5 58.9
A34 P[23] Porcine 72.9 74.8 64.5 64.0
TUCH P[24] Simian 71.4 74.6 66.3 68.4
Dhaka6 P[25] Human 63.1 59.2 60.5 56.1
134/04-15 P[26] Porcine 72.3 71.5 67.7 64.7
a

The nucleotide and amino acid sequence identities of VP4 between the KJ44 and KJ75 strains were 66.3% and 66.4%, respectively.