TABLE 4.
Isolates identified to species level by conventional methods and to genus level or unidentified by SmartGene
Conventional identification | SmartGene reference | % Identity scorea |
---|---|---|
Brevibacterium otitidis | Brevibacterium paucivorans | 97.8 |
Comamonas testosteroni | Acidovorax delafieldii | 98.8 |
Corynebacterium jeikeium | Cornynebacterium jeikeium | 98.8 |
Corynebacterium variabile | Corynebacterium variabile | 98.3 |
Enterobacter cloacae | Enterobacter sp.b | 99.0 |
Enterobacter cloacae | Enterobacter sp. or Pantoea sp.b | 99.4 |
Enterococcus gallinarum | Enterococcus gallinarum | 98.6 |
Escherichia coli | Citrobacter braakii | 96.4 |
Haemophilus aphrophilus | Haemophilus aphrophilus | 98.8 |
Ralstonia paucula | Ralstonia paucula | 98.7 |
Rothia dentocariosa | Rothia dentocariosa | 98.6 |
Stenotrophomonas maltophilia | Stenotrophomonas maltophilia | 98.0 |
Weeksella virosa | Naxibacter alkalitolerans | 96.7 |
Criterion for species identification is ≥99% identity.
SmartGene references at >99% identity contained a genus-level identification only.