Table 2. For each of the three categories of deviations from the α-helical habit, we list the Protein Data Bank entries together with the protein chain and number of the transmembrane helix which contained each of the training instances.
Instances of tight turns | Instances of true kinks | Instances of wide turns |
---|---|---|
2OCC:A8 | 2OCC:A2 | 2OCC:A2 |
1AR1:A8 | 2OCC:A5 | 2OCC:G1 |
1PRC:L3 | 2OCC:A6 | 1AR1:A2 |
1C3W:A6 | 2OCC:A6 | 1BE3:C8 |
1E12:A6 | 2OCC:A10 | 1AIJ:L3 |
1EHK:A8 | 2OCC:B2 | 1AIJ:M3 |
1EZV:C6 | 2OCC:B2 | 1PRC:L3 |
1JGJ:A6 | 2OCC:M1 | 1PRC:M3 |
1JB0:L1 | 1AR1:A2 | 1F88:A5 |
1JB0:M1 | 1AR1:A5 | 1EHK:A5 |
1M56:A8 | 1AR1:A6 | 1EYS:L3 |
2OCC:D1 | 1AR1:A6 | 1EYS:M3 |
1AR1:A11 | 1AR1:B2 | 1JB0:A3 |
1BE3:D9 | 1AR1:B2 | 1JB0:B7 |
1AIJ:L3 | 1BE3:D9 | 1JB0:I1 |
1AIJ:M3 | 1C3W:A2 | 2OCC:A2 |
1AIJ:M5 | 1C3W:A3 | 2OCC:A10 |
1PRC:L5 | 1E12:A2 | 2OCC:I1 |
1PRC:L5 | 1E12:A3 | 1AR1:A2 |
1PRC:M3 | 1EUL:A11 | 1AR1:A10 |
1PRC:M5 | 1F88:A4 | 1C3W:A7 |
1E12:A3 | 1F88:A6 | 1E12:A5 |
1F88:A3 | 1F88:A7 | 1E12:A7 |
1F88:A7 | 1F88:A7 | 1EUL:A1 |
1EHK:A4 | 1FX8:A7 | 1F88:A2 |
1EHK:A5 | 1FX8:A8 | 1FX8:A8 |
1EHK:A6 | 1EHK:A2 | 1EHK:A2 |
1EHK:A10 | 1EHK:A3 | 1EHK:A10 |
1EYS:L3 | 1EHK:A6 | 1JGJ:A5 |
1EYS:M3 | 1EHK:A6 | 1JGJ:A7 |
1EYS:M5 | 1EHK:A9 | 1JB0:A3 |
1EYS:M5 | 1EHK:A13 | 1JB0:A7 |
1JB0:A10 | 1EZV:G1 | 1JB0:B3 |
1JB0:B10 | 1JGJ:A3 | |
1JB0:I1 | ||
1M56:A5 | ||
1M56:A6 | ||
1M56:B2 | ||
1KQF:C2 | ||
2OCC:A10 | ||
2OCC:C3 | ||
2OCC:C6 | ||
2OCC:K1 | ||
2OCC:L1 | ||
1AR1:A10 | ||
1EUL:A1 | ||
1F88:A3 | ||
1FX8:A8 | ||
1EZV:D1 | ||
1JGJ:A2 | ||
1JGJ:A4 | ||
1JB0:A9 | ||
1JB0:B9 | ||
1JB0:L1 | ||
1M56:A9 |
The entries above (resp. below) the horizontal line in each column have proline (resp. a residue other than proline) as their signature residue.