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. 2003 Aug 1;31(15):4663–4672. doi: 10.1093/nar/gkg653;

Table 6. Running times for the pattern matching algorithm for q = 12 and different v.

v No. neighbors No. neighbors found Avg. running time (s) v-neighbors/s
0 1 246 000 0.82 300 000
1 37 2 347 258 4.2 560 000
2 631 28 288 787 43 660 000
3 6571 281 685 270 360 780 000
4 46 666 1 988 512 822 2200 900 000

For each choice of v, the following is reported: the potential number of v-neighbors for each q-gram (computed using equation 1), the number of v-neighbors present in the dataset, the average running time after subtraction of the average time needed to construct the database (19.53 s), the number of v-neighbors found per second.