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. 2007 Jan;13(1):1–4. doi: 10.1261/rna.232907

FIGURE 2.

FIGURE 2.

Screen shot from the GBROWSE menu. (A) Displayed is the edited sequence of COXIII (long yellow bar) together with the binding sites of gRNAs as predicted from minicircles (short blue bars), gcDNAs (short green bars) from this study, or previously predicted gRNAs (short yellow bars). Lines between two blue bars indicate that the gRNAs reside on the same minicircle. gRNAs with overlapping target regions are displayed in stacks. (B) Hovering over a displayed gRNA (short blue bar) opens a small window, which shows the alignment between the maxicircle transcript (top strand; 5′ to 3′) and the gRNA (bottom strand; 3′ to 5′). Furthermore, it displays the positioning of the gRNA gene on the corresponding minicircle together with the surrounding inverted repeats.