Table 5.
Classification Power for Selected Candidate Genes Based on Real-Time qRT-PCR.
Prediction Power for pN-/pN+ | Prediction Power for ECS-/ECS+ | |||||||
Wilcoxon P | ROC (AUC) | Sensitivity | Specificity | Wilcoxon P | ROC (AUC) | Sensitivity | Specificity | |
BMP2 | .043 | 74 | 82 | 73 | .069 | 74 | 86 | 68 |
CTTN | <.0001 | 94 | 91 | 80 | .004 | 88 | 86 | 74 |
EEF1A1 | .078 | 71 | 55 | 33 | .064 | 74 | 57 | 26 |
ASAH1 | .259 | 64 | 27 | 73 | .209 | 67 | 29 | 74 |
MTUS1 | .364 | 61 | 64 | 33 | .544 | 58 | 57 | 37 |
GTSE1 | .013 | 79 | 73 | 80 | .107 | 71 | 71 | 74 |
MMP9 | .001 | 88 | 82 | 93 | .001 | 95 | 100 | 89 |
EGFR | .004 | 82 | 73 | 80 | .055 | 75 | 71 | 79 |
The best model* | ||||||||
Model for pN-/pN+ | Sensitivity | Specificity | Overall accuracy rate (%) | Model for ECS-/ECS+ | Sensitivity | Specificity | Overall accuracy rate (%) | |
CTTN+MMP9+EGFR | 100 | 100 | 84.6** | CTTN+EEF1A1+MMP9 | 100 | 100 | 84.6** |
The best model is generated based on stepwise logistic model selection.
The overall accuracy rate is estimated by the leave-one-out cross validation approach.