I-Ak auxiliary pockets tolerate a wide range of peptide
anchors. HEL(48-61) auxiliary anchors were individually substituted
with aliphatic, nonpolar, polar, and charged residues. The relative
binding affinities of these peptides for I-Ak is listed on
the right. Highlighted are the individual HEL(48-61) auxiliary anchor
substitutions that alone were able to completely prevent peptide
binding despite the presence of the strong P1 Asp52: P4 substitutions
with Lys, Trp, and Tyr, and P6 substitution with Lys. NB, nonbinding.