Table 1.
Functional class | Number of genes on the chip (N) | Number of transcripts detected (n) | n/N × 100 (%) | Transcripts detected (%) |
---|---|---|---|---|
Metabolism | 315 | 112 | 35.5 | 19.8 |
Transcriptional regulation | 268 | 74 | 27.6 | 13.1 |
Cell surface receptors/CAMs/ion channels | 181 | 63 | 34.8 | 11.1 |
Translation | 60 | 52 | 86.6 | 9.2 |
Cytoskeleton/structural proteins | 149 | 48 | 32.2 | 8.5 |
Signal transduction | 107 | 41 | 38.3 | 7.2 |
RNA binding | 59 | 29 | 49.1 | 5.1 |
Transcription/replication/repair | 73 | 28 | 38.3 | 4.9 |
Unknown function | 85 | 23 | 27.0 | 4.0 |
Proteolytic systems/apoptosis | 62 | 22 | 35.4 | 3.9 |
Cell cycle | 37 | 18 | 48.6 | 3.1 |
Transposable elements | 35 | 18 | 51.4 | 3.1 |
Chromatin structure | 36 | 18 | 50.0 | 3.1 |
Heat-shock proteins | 18 | 10 | 55.5 | 1.7 |
Secreted proteins | 34 | 7 | 20.5 | 1.2 |
ΣN = 1519 | Σn = 563 |
Genes expressed in stage 10–17 wild-type embryos raised under standard conditions (25°C), grouped according to functional classes. Number of genes within a functional group present on the chip (N); total number of genes represented on the chip, ΣN = 1,519. Number of genes expressed within a functional group (n); total number of transcripts detected Σn = 563. (n/N × 100 in %) Distribution of genes expressed within a functional group in relation to the total number of identified genes in this group present on the chip. Distribution of genes expressed within a functional group, given as percentage of the total number of genes expressed.