Table 1.
Primer sequences and cycling conditions for semiquantitation of target gene expression
Primer | Sequence | Amplicon size (bp) | Cycling conditions |
---|---|---|---|
MTP-(F) | 5′ GGA CTT TTT GGA CAA AAG TGA C 3′ | 699 | 94°C 40 s, 53°C 1 min, 68°C 2 min; 29 cycles |
MTP-(R) | 5′ GGA GAA ACG GTC ATA ATT GTG 3′ | ||
ApoC-III (F) | 5′ CTC AGC TTC ATG CAG GGC TAC 3′ | 319 | 94°C 40 s, 54°C 1 min, 72°C 1 min; 26 cycles |
ApoC-III (R) | 5′ GGT AGG AGA GCA CTG AGA ATA CTG TC 3′ | ||
ApoA-I (F) | 5′ ATG AAA GCT GCG GTG CTG ACC 3′ | 456 | 94°C 40 s, 60°C 1 min, 72°C 1 min; 21 cycles |
ApoA-I (F) | 5′ CAC CTT CTG GCG GTA GAG CTC 3′ | ||
ApoE (F) | 5′ ACT GGC ACT GGG TCG CTT T 3′ | 163 | 94°C 40 s, 52°C 1 min, 72°C 1 min; 30 cycles |
ApoE (R) | 5′ GTT GTT CCT CCA GTT CCG ATT 3′ | ||
GAPDH (F) | 5′ AGT CAG CCG CAT CTT CTT TTG C 3′ | 298 | Changed according to different target genes |
GAPDH (R) | 5′ CTC CTG GAA GAT GGT GAT GGG A 3′ |