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. 1999 Jul 20;96(15):8396–8401. doi: 10.1073/pnas.96.15.8396

Table 1.

Crystallographic analysis (MIR and MAD phasing) and refinement statistics of ERA protein

Resolution, Å Redundancy,* Completeness (last shell), (%) Rsym # Sites Rscale Phasing power§
Centric, iso Acentric, iso/ano
Native data 2.4 6.4 99.7 (99.1) 0.056
MIR phasing (mean figure of merit = 0.71)
 EMP (Tris buffer) 3.5 3.2 96.3  (82.9) 0.086 4 0.216 1.4 1.9/1.2
 EMP (Hepes buffer) 2.95 3.5 98.3  (97.1) 0.075 8 0.130 1.3 1.7/0.94
 APMA 4.0 2.8 97.5  (97.9) 0.098 4 0.201 0.98 1.3/0.90
 (UO2)(NO3)2 3.2 3.2 98.8  (98.8) 0.084 2 0.080 0.34 0.28/0.26
MAD phasing (EMP, mean figure of merit = 0.81)
 λ1 = 1.00870 Å 2.6 5.4 99.4  (99.1) 0.064 4 0.023 1.7 2.1/2.6
 λ2 = 1.00764 Å 2.6 5.5 99.5  (99.1) 0.070 4 0.022 1.3 1.6/2.3
 λ3 = 0.99184 Å 2.6 5.6 99.5  (99.2) 0.076 4 0.034 n.a. n.a./2.6
 λ4 = 1.00903 Å 2.6 5.7 99.5  (99.1) 0.063 4 0.034 1.1 1.5/2.0
Structure refinement
 Resolution (Å), 8-2.4
 Reflections (I/σ(I) > 2), 28, 848
 Completeness (last shell), 82.9 (56.9)
R/Rfree, 0.243/0.298
 rms deviations, bond/angle, 0.009 Å/1.55°
 Protein atoms, 4,618
 Sulfate ions, 5
 Water molecules, 150

APMA, 4-aminophenylmercuric acetate. n.a., not applicable. 

178

Redundancy is the average number of observations for each unique reflection. 

Rsym = Σ|In − 〈In〉|/ΣIn, where 〈In〉 is the average intensity over symmetric equivalents. 

Rscale = Σ|IPHIP|/ΣIP

§

Phasing power 〈fh〉/〈E〉, where 〈fh〉 and 〈E〉 are the rms deviation of the heavy-atom structure factor and the lack of closure error, respectively.