Table 2.
Site-based AthaMap data increase
| Family | Factor | Synonyms | AGI | Screening sequences | Number of sites | Reference |
|---|---|---|---|---|---|---|
| AP2/EREBP | ERF7 | At3g20310 | GAGCCGCCA | 344 | (40) | |
| TINY2 | DREB3 | At5g11590 | GAGCCGCCAC | 659 | (41) | |
| CTACCGACAT | ||||||
| CTGCCGACAT | ||||||
| CTTCCGACAT | ||||||
| CTATCGACAT | ||||||
| CTACCGTCAT | ||||||
| bHLH | MYC2 | JIN1, ZBF1, bHLH6, RAP1 | At1g32640 | TATACGTGTC GACACGTGGC | 662 | (42) |
| CAMTA | SR1 | At2g22300 | AAACGCGGAA | 427 | (43) | |
| AAACGCGTAA | ||||||
| AAACGCGCAA | ||||||
| AACCGCGGAA | ||||||
| AACCGCGCAA | ||||||
| MYB | CCA1 | At2g46830 | GCTAACTCG | 309 | (44) | |
| LHY | At1g01060 | GCTAACTCG | 309 | (44) | ||
| WER | MYB66 | At5g14750 | TCTCCAACTG | 877 | (45) | |
| TACAACCGCA | ||||||
| TCTATGCCTG | ||||||
| TACGCATGCA | ||||||
| ACTAACGGTA | ||||||
| ACTAACAGTA | ||||||
| WRKY(Zn) | WRKY40 | At1g80840 | CTTTGACCAA | 641 | (46) |
A.thaliana TFs and screening sequences are listed with the corresponding core sequences being underlined. The number of sites annotated in AthaMap and the respective references are given.