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. 2006 Dec 20;1(1):e44. doi: 10.1371/journal.pone.0000044

Table 3. HCMp Categories And HMM Analyses.

graphic file with name pone.0000044.t003.jpg

ORF_ID GGCY CxxC CxC MEME group TMK HMM (E value) VSP HMM (E value) EGF HMM (E value) PC6B repeats
113797* 1 29 0 VSP 0.005 2.3E-306 0.30
112633 0 6 28 EGF-like 0.290 4.20E-04 6.80E-40
113213 0 6 28 EGF-like 0.120 3.10E-04 4.10E-38
113531 0 6 28 EGF-like 0.280 0.002 3.80E-37
16936 0 4 26 EGF-like 0.270 0.028 6.70E-37
113836 0 6 28 EGF-like 0.072 0.007 6.80E-35
137727 0 6 28 EGF-like 0.200 0.003 1.40E-32
114991 0 5 24 EGF-like 0.160 0.009 4.30E-31
114626 0 6 28 EGF-like 0.210 0.002 1.50E-30
40376** 5 77 8 Group 1 4.30E-05 4.8E-23 0.01 4
16318 3 30 25 Group 1 0.004 9.1E-35 2.00E-29 1
15008 3 19 2 Group 1 0.170 1.30E-05 0.01 1
103454 3 22 1 Group 1 0.030 6.7E-17 0.16
91707 2 21 3 Group 1 0.070 3.40E-06 0.01 1
7715 2 20 3 Group 1 0.059 9.3E-10 0.02 1
10659 2 31 0 Group 1 0.011 4.7E-14 0.07 1
25816 2 38 1 Group 1 7.40E-04 7E-16 0.12
101805 2 22 1 Group 1 0.036 1.1E-16 1.10
15317 1 24 22 Group 1 0.012 3.4E-27 2.50E-36 1
11309 1 69 3 Group 1 2.70E-05 3.9E-18 0.03 2
32607 1 38 0 Group 1 0.008 6.4E-48 0.13 2
16842 1 28 1 Group 2 0.025 5.6E-11 0.05
15521 1 24 3 Group 2 0.390 3.9E-14 0.12
39904 1 30 2 Group 2 0.005 8.00E-08 0.15
91099 0 5 25 Group 2 0.076 0.008 5.50E-45
24880 0 4 17 Group 2 0.140 7.50E-04 1.20E-22
16374 0 19 6 Group 2 0.037 3.50E-05 2.80E-08
17328 0 70 18 Group 2 2.90E-05 1.20E-08 0.03
16721 0 30 0 Group 2 0.018 2.30E-05 0.03
15475 0 31 1 Group 2 0.087 2.00E-06 0.04
9620 0 50 0 Group 2 2.20E-04 2.50E-06 0.07
14017 0 47 0 Group 2 5.70E-04 2.10E-06 0.10
22547 0 61 2 Group 2 1.20E-04 2.30E-05 0.11 5
112126 2 34 0 Group 3 0.010 6.1E-12 0.19
27717 1 34 0 Group 3 0.009 1.4E-11 0.12
114891 1 34 0 Group 3 0.009 1.9E-12 0.24
113987 1 34 0 Group 3 0.011 3E-11 0.29
114930 3 24 3 Group 4 0.007 1.3E-13 0.04
112828 3 24 3 Group 4 0.008 1.4E-13 0.05
114089 3 24 3 Group 4 0.008 2.3E-15 0.07
114617 2 23 3 Group 4 0.008 2.7E-13 0.04
114042 2 24 3 Group 4 0.009 1.1E-14 0.05
137715 0 36 0 Group 5 0.004 5.00E-06 0.01
112432 0 35 0 Group 5 0.009 5.20E-06 0.01
16716 0 36 0 Group 5 0.003 3.00E-09 0.02
21321 0 36 0 Group 5 0.004 1.4E-09 0.11
15250 0 32 0 Group 6 0.015 2.60E-06 0.03
41942 0 30 0 Group 6 0.051 2.20E-06 0.11
114470 2 21 0 Group 6 0.120 1.8E-58 0.29
113512 2 21 0 Group 6 0.140 1.6E-73 0.29
114180 12 110 1 TMK-like 4.70E-05 1.1E-10 0.10 1
113416 12 108 1 TMK-like 1.30E-04 6.1E-11 0.12 1
113319 11 110 2 TMK-like 9.50E-05 2.4E-10 0.12 1
112673 4 56 1 VSP-like 8.40E-05 4E-54 0.20 2
112135 4 56 1 VSP-like 1.10E-04 6.3E-57 0.20 2
115066 4 56 0 VSP-like 7.70E-05 2.1E-56 0.21 2
113801 3 34 1 VSP-like 0.003 1.6E-70 0.16 1
112584 3 34 1 VSP-like 0.004 5.3E-64 0.19 1
113297 3 34 1 VSP-like 0.004 2.3E-65 0.83 1
137672 3 34 1 VSP-like 0.002 2.3E-70 1.50 1
114852 2 34 1 VSP-like 0.002 6.3E-69 0.19 1
112305 2 34 1 VSP-like 0.002 3.9E-72 0.24 1