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. 2005 Mar;58(3):301–307. doi: 10.1136/jcp.2004.022830

Table 1.

 Identification of the 17 blood culture isolates of non-perfringens clostridium by 16S ribosomal RNA (rRNA) gene sequencing

Isolate Species identification by 16S rRNA gene sequencing GB AC of closest match % Nucleotide identity*
1 C barati X68174 99.8
2 C difficile AF072474 99.9
3 C disporicum Y18176 99.0
4 C indolis AF028351 97.9
5 C innocuum AF028352 99.9
6 C orbiscindens Y18187 100
7 C paraputrificum AB032556 99.4
8 C paraputrificum AB032556 100
9 C paraputrificum AB032556 100
10 C paraputrificum AB032556 99.8
11 C ramosum M23731 99.8
12 C ramosum M23731 99.9
13 C ramosum M23731 99.8
14 C septicum U59278 99.9
15 C sporosphaeroides M59116 98.5
16 C tertium AF227826 99.9
17 C tertium Y18174 100

AC, accession number; GB, GenBank.

*% Nucleotide identity of 16S rRNA gene sequence to the closest match in GB.