Table 1. Data collection and refinement statistics.
Value | |||
---|---|---|---|
Parameter | Protein PDB code… | Gly-Phe-CH2–hDPPI (2DJF) | Native hDPPI (2DJG) |
Wavelength (Å) | 1.094 | 1.5418 | |
Space group | I222 | I222 | |
Cell parameters (Å) | 87.00, 89.03, 115.57 | 87.48, 88.68, 114.35 | |
Resolution range | 28.75–2.0 (2.07–2.0) | 24.04–2.05 (2.12–2.05) | |
Number of measured reflections | 143822 | 120690 | |
Number of unique reflections | 28953 | 25787 | |
Completeness | 99.3 (97.5) | 96.1 (96.1) | |
Rsym | 0.063 (0.211) | 0.051 (0.313) | |
Number of non-H atoms used in refinement | 3071 | 3030 | |
Protein | 2748 | 2720 | |
Water | 246 | 211 | |
Inhibitor | 16 | – | |
Cruickshanks DPI* | 0.131 Å | 0.157 Å | |
R factor | 0.161 | 0.176 | |
Rfree | 0.200 | 0.221 | |
Ramachandran plot outliers† | 3.9% | 3.0% | |
Mean B value (overall, Å2) | 26.3 | 26.1 | |
B values | |||
Protein | 25.0 | 24.6 | |
Water | 32.6 | 30.2 | |
Inhibitor | 37.3 | – |