Table 3.
Genotype | Allele ratio | Cpm ratio of the cSNPs of the LPH gene analysed | |||||||||
Patient No | C/T−13910 | G/A−22018 | Ex1 A/G | Ex1 A/G | Ex2 | Ex6 G/T | Ex10 G/A | Ex13 C/T | Ex17 C/T | Lactase activity | L/S ratio |
1 | CC | GG | 49/51 | 0.70 | 4.4 | 5 | 0.08 | ||||
2 | CC | GG | 47/53 | 0.63 | 4.7 | 7 | 0.08 | ||||
3 | CC | GG | 46/54 | 0.60 | 4.7 | 9 | 0.05 | ||||
4 | CC | GG | 0.50 | 6 | 0.11 | ||||||
5 | CC | GG | 46/54 | 0.61 | 4.4 | 5 | 0.09 | ||||
6 | CC | GG | 45/55 | 0.58 | 7 | 0.06 | |||||
7 | CC | GG | 1.1 | 1.3 | 5 | 0.07 | |||||
8 | CC | GG | 1.5 | 7 | 0.06 | ||||||
9 | CC | GG | 46/54 | 0.61 | 2.9 | 4 | 0.08 | ||||
10 | CC | GG | 1.4 | 6 | 0.13 | ||||||
11 | CC | GG | 48/52 | 0.66 | 4 | 0.18 | |||||
12 | CT | GA | 46 | 0.53 | |||||||
13 | CT | GA | 37 | 0.58 | |||||||
14 | CT | GA | 95/5 | 11 | 19 | 33 | 0.39 | ||||
15 | CT | GA | 95/5 | 13 | 45 | 19 | 0.45 | ||||
16 | CT | GA | 96/4 | 17 | 42 | 26 | 0.56 | ||||
17 | CT | GA | 97/3 | 19 | 49 | 32 | 0.37 | ||||
18 | CT | GA | 93/7 | 7.1 | 35 | 40 | 0.50 | ||||
19 | CT | GA | 94/6 | 9.7 | 39 | 41 | 0.37 | ||||
20 | CT | GA | 27 | 0.38 | |||||||
21 | CT | GA | 22 | 0.35 | |||||||
22 | CT | GA | 7.6 | 32 | 0.58 | ||||||
23 | CT | GA | 78/22 | 3.3 | 18 | 35 | 0.47 | ||||
24 | CT | GA | 94/6 | 10 | 29 | 0.40 | |||||
25 | CT | GA | 90/10 | 6.1 | 27 | 48 | 0.46 | ||||
26 | CT | GA | 96/4 | 19 | 42 | 13 | 0.46 | ||||
27 | CT | GA | 5.5 | 46 | 0.37 | ||||||
28 | CT | GA | 21 | 0.35 | |||||||
29 | CT | GA | 99/1 | 37 | 64 | 27 | 0.40 | ||||
30 | CT | GA | 90/10 | 6.1 | 25 | 32 | 0.48 | ||||
31 | CT | GA | 21 | 0.45 | |||||||
32 | CT | GA | 85/15 | 4.8 | 18 | 48 | 0.58 | ||||
33 | CT | GA | 26 | 0.36 | |||||||
34 | CT | GA | 84/16 | 4.5 | 13 | 49 | 0.69 | ||||
35 | TT | AA | 55 | 0.78 | |||||||
36 | TT | AA | 52 | 0.97 | |||||||
37 | TT | AA | 20 | 0.84 | |||||||
38 | TT | AA | 47 | 0.79 | |||||||
39 | TT | AA | 35 | 1.05 | |||||||
40 | TT | AA | 1.6 | 43 | 0.92 | ||||||
41 | TT | AA | 65 | 0.87 | |||||||
42 | TT | AA | 79 | 1.04 | |||||||
43 | TT | AA | 41 | 0.64 | |||||||
44 | TT | AA | 63 | 0.66 | |||||||
45 | TT | AA | 87 | 0.79 | |||||||
46 | TT | AA | 18 | 1.00 | |||||||
47 | TT | AA | 56 | 0.82 | |||||||
48 | TT | AA | 83 | 0.65 | |||||||
49 | TT | AA | 84 | 0.74 | |||||||
50 | TT | AA | 38 | 0.74 | |||||||
51 | TT | AA | 48 | 0.49 | |||||||
52 | TT | AA | 20 | 0.69 |
For exon 1, allelic expression is also shown as per cent.