TABLE 5.
Comparative analysis of the influences of transcriptional-activity divergence and transcriptional-variability divergence on sequence divergence between paralogous genes
Species | Rad | Rvd | Rad|vd | Rvd|ad | Cad | Cvd | PCad | PCvd |
---|---|---|---|---|---|---|---|---|
dN | ||||||||
Human | 0.126 | 0.258 | −0.139 | 0.264 | −2.443 | 3.322* | 20.73 | 79.27 |
Mouse | 0.140 | 0.230 | −0.119 | 0.219 | −4.489 | 7.131*** | 23.19 | 76.81 |
Rat | 0.174 | 0.157 | 0.093 | 0.053 | −1.466 | 19.670*** | 13.80 | 86.20 |
Fly | 0.057 | 0.152 | −0.358 | 0.382 | −3.333 | 10.404*** | 4.14 | 95.86 |
Plant | 0.348 | 0.351 | 0.017 | 0.048 | 1.338 | 3.939* | 34.71 | 65.29 |
Yeast | 0.132 | 0.051 | 0.124 | −0.023 | −0.037 | 0.907 | 44.21 | 55.79 |
dS | ||||||||
Human | 0.176 | 0.298 | −0.108 | 0.265 | −0.749 | 3.140 | 1.55 | 98.45 |
Mouse | 0.218 | 0.250 | 0.005 | 0.126 | −1.721 | 3.274 | 29.65 | 70.35 |
Rat | 0.164 | 0.179 | 0.059 | 0.093 | 0.764 | 18.286*** | 19.57 | 80.43 |
Fly | 0.288 | 0.354 | −0.228 | 0.310 | 0.812 | 6.031** | 25.86 | 74.14 |
Plant | 0.270 | 0.268 | 0.036 | 0.013 | 2.920 | 2.338 | 53.52 | 46.48 |
Yeast | 0.141 | 0.097 | 0.105 | 0.026 | 0.721 | 0.968 | 49.22 | 50.78 |
Transcriptional-activity divergence (ad) and transcriptional-variability divergence (vd) are the predictor variables. Synonymous substitution rate (dS) and nonsynonymous substitution rate (dN) are the response variables. Transcriptional-activity divergence was measured as |z1 − z2|, where z1 and z2 mean the transcriptional activity of two paralogous genes. Transcriptional-variability divergence was measured as |CV1 − CV2|, where CV1 and CV2 mean the transcriptional variability of two paralogous genes. See the Table 2 legend for details.