Table 1.
Gene | Primer | Sequence | RT-PCR product (base pairs) | Annealing temperature | Cycles | Reference |
GAPDH | up | CCACCCATGGCAAATTCCATGGCA | 600 | 60 | 25 | Stratagene |
down | TCTAGACGGCAGGTCAGGTCCACC | |||||
Actin | up | TGAAGTCTGACGTGGACATC | 254 | 60 | 25 | [7] |
down | ACTCGTCATACTCCTGCTTG | |||||
COL1A2 | up | AGACCCAAGGACTATGAAGT | 509 | 55 | 25 | [NCBI: NM_000089] |
down | ACATCATTAGAGCCCTGTAG | |||||
COL2A1 | up | CATCTGGTTTGGAGAAACCATC | 606 | 60 | 37 | [NCBI: J00116] |
down | GCCCAGTTCAGGTCTCTTAG | |||||
COL3A1 | up | GATGGGGTCAAATGAAGGTGA | 546 | 60 | 25 | [NCBI: NM_000090] |
down | GCAGATGGGCTAGGATTCAAA | |||||
COL10A1 | up | CCTCTTGTTAGTGCCAACCAG | 424 | 60 | 37 | [NCBI: X98568] |
down | GAGCCACTAGGAATCCTGAG | |||||
Aggrecan | up | ACTTCCGCTGGTCAGATGGA | 111 | 55 | 37 | [8] |
down | TCTCGTGCCAGATCATCACC | |||||
TGF-β1 | up | CAGAAATACAGCAACAATTCCTGG | 187 | 60 | 37 | Stratagene |
down | TTGCAGTGTGTTATCCGTGCTGTC | |||||
BMP-7 | up | TTTGGGGCCAAGTTTTTCTG | 410 | 60 | 37 | [9] |
down | ACAGGAACTTCCGGGTCAAT | |||||
BMP-2 | up | GGGAAAACAACCCGGAGATT | 503 | 60 | 37 | [NCBI: NM_001200] |
down | TTAAGGCGTTTCCGCTGTTT | |||||
FGF-2 | up | TACAACTTCAAGCAGAAGAG | 283 | 60 | 37 | [10] |
down | CAGCTCTTAGCAGACATTGG | |||||
VEGF | up | AAGTGGTCCCAGGCTGCA | 296 | 60 | 37 | [NCBI: AY047581] |
down | ATCTCTCCTATGTGCTGGCC | |||||
IL-1 | up | AAGCAGCCATGGCAGAAGTA | 482 | 60 | 37 | [NCBI: M15840] |
down | GAACACCACTTGTTGCTCCA | |||||
TNF- | up | GAGTGACAAGCCTGTAGCCCATGTTGTAGCA | 444 | 60 | 37 | Clontech |
down | GCAATGATCCCAAAGTAGACCTGCCCAGACT |
The sources for sequences are given in the last column, the numbers in brackets refer to the literature, and the other numbers indicate the codes from sequences in PubMed. BMP, bone morphogenetic protein; COL, collagen type; FGF, fibroblast growth factor; GAPDH, glucosealdehyde phosphate dehydrogenase; IL, interleukin; RT-PCR, reverse transcription-PCR; TNF, tumor necrosis factor; VEGF, vascular endothelial growth factor.