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. 2006 Oct 6;92(3):731–743. doi: 10.1529/biophysj.106.093062

FIGURE 3.

FIGURE 3

Force-ramp unfolding of P5GA hairpin. (A) An example of FEC at the loading rate rf = 45 pN/s (ks = 0.07 pN/nm, v = 0.64 μm/s). The data points are recorded every 50 μs (gray), but for better illustration the running average is displayed every 500 μs (red). (B) The end-to-end distance (R) as a function of time. (C) Time-dependence of f. The loading rate rf = df/dt is nearly a constant. (D) Distribution of unbinding forces from 100 trajectories at four loading rates Inline graphic, Inline graphic, Inline graphic, and 10 Inline graphic (Inline graphic(ks = 0.7 pN/nm, v = 6.4 μm/s)). The red star is the rupture force value (f* = 12.5 pN) at rf = 45 pN/s. (E) Plot f*, the most probable unfolding force, as a function of rf. The position of transition state Inline graphic is computed using Inline graphic. The inset shows the variation of Inline graphic as a function of rf.