Table 2.
Associations of gene ontology terms with promoter types
Numbers of genes are those remaining after masking genes occurring higher in the list for the given promoter type; thus, all sets for a given promoter type are independent. For this analysis we used all conserved promoters that were strongly predicted by our discriminator to be AP or SP (having aLLRs in the top and bottom thirds of the aLLR distribution, respectively; see Methods).
