Table 2.
Optimized primer concentrations, slope of the regression line and R2 statistics for all real-time, quantitative RT-PCR assays
Target | Primer concn (μm) | ΔRn significance threshold | Ct | R2 | Gradient |
---|---|---|---|---|---|
IFN-α | 0·1 | 0·03 | 15–40 | 0·9898 | 3·95 |
IFN-β | 1·0 | 0·02 | 15–40 | 0·9941 | 3·016 |
IFN-γ | 0·6 | 0·03 | 15–40 | 0·9995 | 3·135 |
IL-1β | 0·4 | 0·02 | 15–40 | 0·9999 | 3·408 |
IL-2 | 0·6 | 0·02 | 15–40 | 0·989 | 2·748 |
TGF-β4 | 0·1 | 0·04 | 15–40 | 0·9893 | 3·589 |
β2M | 1·0 | 0·01 | 15–40 | 0·9959 | 3·442 |
MHC IA | 1·0 | 0·01 | 15–40 | 0·9916 | 3·213 |
ΔRn = change in the reporter dye; Ct = threshold cycle value, the cycle at which the change in the reporter dye levels detected passes the ΔRn; R2 = coefficient of regression.