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. 2006 Dec 7;80(1):76–90. doi: 10.1086/510518

Table A4. .

Interactions between Fetal Genotype and Maternal Smoking[Note]

Danish
Iowa
Gene and
Phenotype
C×E 1
(I1)
C×E 2
(I2)
C×E LRT
(P)
CxE 1
(I1)
CxE 2
(I2)
C×E LRT
(P)
Pa
EPHX1_snp1:
 Allb .82 .68 .62 .92 16.6 .004 .017
 No anomaliesc .94 .77 .87 .96 14.0 .01
GSTA4_snp1:
 CPO .20 1.78 .01 1.37 1.72 .78
GSTA4_snp2:
 CPO .23 3.63 .01 .78 2.60 .65
GSTP1_snp1:
 CL/P .50 1.94 .02 1.26 .86 .89
HIF1A:
 Allb .82 .37 .20 3.02 1.13 .02 .027
 No anomaliesc .82 .39 .28 2.89 1.19 .04
UG1A7_snp1:
 Allb 2.30 1.44 .08 2.96 .53 .02 .014
 No anomaliesc 2.14 1.63 .12 3.34 .53 .01
 CPO 13.5 1.19 .02 4.94 .70 .25

Note.— I1 is the estimated interaction effect of one fetal copy of the variant allele together with maternal smoking; I2 is the estimated interaction effect of two fetal copies of the variant allele together with maternal smoking.

a

For formal hypothesis testing, we used Fisher’s method to combine P values that were based on data from all OC cases in the Danish and Iowan populations.

b

Includes data from all subjects with nonsyndromic OC.

c

Includes data from subjects without other minor anomalies.