. Author manuscript; available in PMC: 2007 Feb 5.

Published in final edited form as: FEBS Lett. 2006 Nov 14;580(28-29):6721–6729. doi: 10.1016/j.febslet.2006.11.013

Table 4.

Mis-matched bases between the SAGE tag part of 3' ESTs and their mapped genomic regions*

No. mismatched bases	Location of mismatches/gaps in SAGE tag part of 3’ ESTs														Total No. 3’ ESTs (%)
No. mismatched bases	C	A	T	G	x	x	x	x	x	x	x	x	x	x
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	139 (6)
1	8	2	6	1	156	229	137	114	75	87	49	39	17	3	923 (38)
2	74	33	27	6	238	236	180	160	95	72	31	25	12	5	597 (25)
3	135	67	44	24	92	100	79	54	40	26	47	14	3	4	243 (10)
4	149	134	118	80	61	46	39	32	24	25	23	15	10	4	190 (8)
5	125	138	140	119	85	69	28	30	25	18	14	6	7	6	162 (7)
6	77	82	75	68	63	59	31	17	16	18	6	5	8	3	88 (4)
7	19	20	22	19	20	17	19	11	7	4	5	5	4	3	25 (1)
8	9	9	6	8	7	9	8	4	7	9	4	6	5	5	12 (0)
9	19	17	11	16	18	13	17	12	10	11	13	14	10	8	21 (1)
10	8	8	8	8	7	10	7	8	4	6	6	4	8	8	10 (0)
11	5	3	3	4	5	4	5	4	4	5	5	3	3	2	5 (0)
12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0 (0)
13	2	2	1	2	1	2	2	2	2	2	2	2	2	2	2 (0)
14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0 (0)
Total	630	515	461	355	753	794	552	448	309	283	205	138	89	53	2,417 (100)

Those include 92 3’ ESTs mapped to X chrosome of which 23 mapped to the locations expected by the original SAGE tags.