Table 7.
Conservation of TARs in chimpanzee and rodents, categorized by their distance to known genes on both strands
| Same strand | Opposite strand | |||||
| Distal | 10 kb | 1 kb | exon | intron | ||
| Found in human AND chimp (15,757) | Distal | 3245 (20.6%) | 469 (3.0%) | 130 (0.8%) | 826 (5.2%) | 1233 (7.8%) |
| 10 kb | 724 (4.6%) | 197 (1.3%) | 56 (0.4%) | 232 (1.5%) | 123 (0.8%) | |
| 1 kb | 327 (2.1%) | 87 (0.6%) | 30 (0.2%) | 46 (0.3%) | 18 (0.1%) | |
| exon | 4492 (28.5%) | 1368 (8.7%) | 323 (2.0%) | 116 (0.7%) | 165 (1.0%) | |
| intron | 1358 (8.6%) | 115 (0.7%) | 21 (0.1%) | 31 (0.2%) | 25 (0.2%) | |
| Distal | 10 kb | 1 kb | Exon | Intron | ||
| Found in human AND mouse (8,776) | Distal | 1256 (14.3%) | 155 (1.8%) | 51 (0.6%) | 668 (7.6%) | 402 (4.6%) |
| 10 kb | 340 (3.9%) | 79 (0.9%) | 20 (0.2%) | 198 (2.3%) | 33 (0.4%) | |
| 1 kb | 136 (1.5%) | 42 (0.5%) | 9 (0.1%) | 25 (0.3%) | 10 (0.1%) | |
| exon | 3398 (38.7%) | 1028 (11.7%) | 217 (2.5%) | 96 (1.1%) | 125 (1.4%) | |
| intron | 419 (4.8%) | 29 (0.3%) | 6 (0.1%) | 24 (0.3%) | 10 (0.1%) | |
| Distal | 10 kb | 1 kb | Exon | Intron | ||
| Found in human AND chimp AND rodents (8,446) | Distal | 1209 (14.3%) | 146 (1.7%) | 46 (0.5%) | 649 (7.7%) | 382 (4.5%) |
| 10 kb | 330 (3.9%) | 75 (0.9%) | 19 (0.2%) | 180 (2.1%) | 30 (0.4%) | |
| 1 kb | 133 (1.6%) | 42 (0.5%) | 8 (0.1%) | 21 (0.2%) | 10 (0.1%) | |
| exon | 3306 (39.1%) | 983 (11.6%) | 206 (2.4%) | 93 (1.1%) | 121 (1.4%) | |
| intron | 393 (4.7%) | 26 (0.3%) | 6 (0.1%) | 22 (0.3%) | 10 (0.1%) | |
| Distal | 10 kb | 1 kb | Exon | Intron | ||
| Found in human AND in chimp NOT in rodents (7,311) | Distal | 2036 (27.8%) | 323 (4.4%) | 84 (1.1%) | 177 (2.4%) | 851 (11.6%) |
| 10 kb | 394 (5.4%) | 122 (1.7%) | 37 (0.5%) | 52 (0.7%) | 93 (1.3%) | |
| 1 kb | 194 (2.7%) | 45 (0.6%) | 22 (0.3%) | 25 (0.3%) | 8 (0.1%) | |
| exon | 1186 (16.2%) | 385 (5.3%) | 117 (1.6%) | 23 (0.3%) | 44 (0.6%) | |
| intron | 965 (13.2%) | 89 (1.2%) | 15 (0.2%) | 9 (0.1%) | 15 (0.2%) | |