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. 2007 Feb 9;3(2):e22. doi: 10.1371/journal.pcbi.0030022

Figure 7. NH4 + at the Site of Deprotonation.

Figure 7

The configuration was taken from umbrella sampling simulations. NH4 + has full access to vestibular water, continuously connected to the bulk solution, to allow the escape of a proton to the bulk in the form of a hydronium ion.