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. 2006 Nov 3;73(2):421–431. doi: 10.1128/AEM.01849-06

TABLE 3.

Sequences of partial 16S rRNA genes obtained from the Danube River and its tributariesa

Phylotype (sequence) GenBank accession no. Length (bp) Classification (confidence level [%]) Closest affiliation Identity (%)
1_1-G5 DQ371841 507 Order Deferribacterales (98) Uncultured cyanobacterium clone SIMO-2301 (AY711667) 99
2_1-G5 DQ371847 507 Class Cyanobacteria (97) Uncultured cyanobacterium clone SIMO-2293 (AY711659) 99
Order Deferribacterales (96)
12_1-G5 DQ371838 519 Phylum Bacteroidetes (100) CFBb bacterium strain WL5-12 (AF497890) 92
11_2-G5 DQ371837 517 Genus Flavobacterium (100) Flavobacterium sp. strain GOBB3-209 (AF321038) 99
16_3-G5 DQ371840 506 Class Cyanobacteria (99) Uncultured cyanobacterium clone SIMO-2301 (AY711667) 99
Order Deferribacterales (97)
25_3-G5 DQ371843 509 Order Actinomycetales (98) Uncultured actinobacterium strain WL5-10 (AF497893) 100
28_5-G5 DQ371845 517 Order Burkholderiales (100) Uncultured betaproteobacterium clone Sta2-25 (AY562332) 97
29_6-G5 DQ371846 511 Class Cyanobacteria (96) Uncultured cyanobacterium DGGE gel band 2 (AY942896) 97
Order Deferribacterales (87)
39_9-G5 DQ371851 518 Genus Cyclobacterium (91) Uncultured CFB group bacterium clone SFD1-9 (AF491677)b 99
41_9-G5 DQ371852 515 Genus Cyclobacterium (95) Bacteroidetes bacterium strain zo35 (AF531006) 99
42_9-G5 DQ371853 508 Class Actinobacteria (97) Uncultured actinobacterium clone R6 (AJ575502) 99
Order Actinomycetales (95)
2_2-G6 DQ371848 500 Phylum Proteobacteria (89) Uncultured alphaproteobacterium clone DC8-48-1 (AY145598) 99
15_5-G6 DQ371839 526 Order Burkholderiales (91) Uncultured bacterium clone fl32-2 (AY544234) 97
24_8-G6 DQ371842 513 Genus Acinetobacter (100) Uncultured bacterium clone OS-26 (AB205957) 100
27_9-G6 DQ371844 520 Order Sphingobacteriales (99) Uncultured bacterium clone TLM09/TLMdgge12a (AF534433) 90
Family Crenotrichaceae (99)
Genus Chitinophaga (99)
31_10-G6 DQ371850 507 Order Sphingobacteriales (97) Uncultured Bacteroidetes bacterium clone LiUU-5-322 (AY509286) 92
Family Crenotrichaceae (97)
Genus Chitinophaga (97)
a

The table shows the GenBank accession number, length, classification according to the Bayesian classification algorithm of the Ribosomal Database Project II, closest affiliation, and percentage of nucleotide identity.

b

CFB, Cytophaga-Flavobacterium-Bacteroides group.