Table 1.
Name | Locus1 | Chr2 | cDNA length3 | Amino Acids4 | EF hands5 | % of Met6 | Identity to OsCaM1(%)7 | Cys 278 | Lys 1169 | Prenylation10 | Myristoylation11 | References |
OsCam1-1 | LOC_Os03g20370 | 3 | 450 | 149 | 4 | 6.0 | 100.0 | + | + | [10] | ||
OsCam1-2 | LOC_Os07g48780 | 7 | 450 | 149 | 4 | 6.0 | 100.0 | + | + | |||
OsCam1-3 | LOC_Os01g16240 | 1 | 450 | 149 | 4 | 6.0 | 100.0 | + | + | |||
OsCam2 | LOC_Os05g41210 | 5 | 450 | 149 | 4 | 6.0 | 98.7 | + | + | [10] | ||
OsCam3 | LOC_Os01g17190 | 1 | 450 | 149 | 4 | 6.0 | 98.7 | + | + | |||
OsCML1 | LOC_Os01g59530 | 1 | 564 | 187 | 4 | 4.3 | 84.6 | + | [8,9,10] | |||
OsCML2 | LOC_Os11g03980 | 11 | 552 | 183 | 4 | 4.9 | 70.3 | + | ||||
OsCML3 | LOC_Os12g03816 | 12 | 552 | 183 | 4 | 4.9 | 68.9 | + | ||||
OsCML4 | LOC_Os03g53200 | 3 | 465 | 154 | 4 | 6.5 | 68.9 | + | + | |||
OsCML5 | LOC_Os12g41110 | 12 | 501 | 166 | 4 | 4.8 | 62.2 | + | + | |||
OsCML6 | LOC_Os11g37550 | 11 | 513 | 170 | 4 | 6.5 | 53.9 | + | ||||
OsCML7 | LOC_Os08g02420 | 8 | 447 | 148 | 2 | 2.8 | 47.7 | + | ||||
OsCML8 | LOC_Os10g25010 | 10 | 576 | 191 | 4 | 5.2 | 47.0 | |||||
OsCML9 | LOC_Os05g41200 | 5 | 468 | 155 | 1 | 3.2 | 46.1 | |||||
OsCML10 | LOC_Os01g72100 | 1 | 558 | 185 | 4 | 4.3 | 45.6 | + | ||||
OsCML11 | LOC_Os01g32120 | 1 | 636 | 211 | 4 | 1.4 | 44.1 | |||||
OsCML12 | LOC_Os01g41990 | 1 | 750 | 249 | 4 | 2.8 | 43.9 | |||||
OsCML13 | LOC_Os07g42660 | 7 | 510 | 169 | 4 | 5.3 | 43.6 | |||||
OsCML14 | LOC_Os05g50180 | 5 | 522 | 173 | 4 | 4.6 | 43.3 | |||||
OsCML15 | LOC_Os05g31620 | 5 | 606 | 201 | 4 | 4.0 | 40.7 | |||||
OsCML16 | LOC_Os01g04330 | 1 | 546 | 181 | 4 | 3.9 | 40.5 | |||||
OsCML17 | LOC_Os02g39380 | 2 | 495 | 164 | 4 | 4.9 | 37.7 | + | ||||
OsCML18 | LOC_Os05g13580 | 5 | 477 | 158 | 4 | 5.7 | 37.7 | + | ||||
OsCML19 | LOC_Os01g72550 | 1 | 441 | 146 | 3 | 7.5 | 37.2 | |||||
OsCML20 | LOC_Os02g50060 | 2 | 525 | 174 | 4 | 4.0 | 35.3 | + | ||||
OsCML21 | LOC_Os05g24780 | 5 | 594 | 197 | 3 | 4.6 | 35.3 | |||||
OsCML22 | LOC_Os04g41540 | 4 | 753 | 250 | 4 | 3.6 | 35.2 | |||||
OsCML23 | LOC_Os01g72540 | 1 | 456 | 151 | 3 | 7.9 | 35.1 | |||||
OsCML24 | LOC_Os07g48340 | 7 | 594 | 197 | 3 | 3.0 | 33.9 | |||||
OsCML25 | LOC_Os11g01390 | 11 | 450 | 149 | 3 | 6.7 | 33.6 | |||||
OsCML26 | LOC_Os12g01400 | 12 | 450 | 149 | 3 | 6.7 | 33.6 | |||||
OsCML27 | LOC_Os03g21380 | 3 | 573 | 190 | 3 | 3.2 | 33.3 | |||||
OsCML28 | LOC_Os12g12730 | 12 | 519 | 172 | 4 | 4.8 | 33.1 | + | ||||
OsCML29 | LOC_Os06g47640 | 6 | 513 | 170 | 3 | 4.1 | 33.1 | |||||
OsCML30 | LOC_Os06g07560 | 6 | 711 | 236 | 4 | 2.1 | 32.8 | |||||
OsCML31 | LOC_Os01g72530 | 1 | 456 | 151 | 3 | 5.3 | 31.6 | |||||
OsCML32 | LOC_Os08g04890 | 8 | 591 | 196 | 3 | 2.6 | 30.2 |
1 The Institute of Genomics Research (TIGR) gene identifier number.
2 Chromosome number in which the gene resides.
3 Length of the coding region in base pairs.
4 Number of amino acids of the deduced amino acid sequence.
5 Number of EF hands based on the prediction by InterProScan.
6 Percentage of methionine (M) residues in the deduced amino acid sequence.
7 Number of identical residues divided by the total number of amino acids that have been aligned expressed in percentage.
8 Presence of a cysteine equivalent to Cys26 of typical plant CaMs at residue 7(-Y) of the first EF-hand.
9 Presence of a lysine equivalent to Lys115 of typical plant CaMs.
10 Presence of a putative prenylation site.
11 Presence of a putative myristoylation site.