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. 2007 Jan 30;7:4. doi: 10.1186/1471-2229-7-4

Table 1.

Characteristics of OsCam and OsCML genes and the encoded proteins

Name Locus1 Chr2 cDNA length3 Amino Acids4 EF hands5 % of Met6 Identity to OsCaM1(%)7 Cys 278 Lys 1169 Prenylation10 Myristoylation11 References
OsCam1-1 LOC_Os03g20370 3 450 149 4 6.0 100.0 + + [10]
OsCam1-2 LOC_Os07g48780 7 450 149 4 6.0 100.0 + +
OsCam1-3 LOC_Os01g16240 1 450 149 4 6.0 100.0 + +
OsCam2 LOC_Os05g41210 5 450 149 4 6.0 98.7 + + [10]
OsCam3 LOC_Os01g17190 1 450 149 4 6.0 98.7 + +
OsCML1 LOC_Os01g59530 1 564 187 4 4.3 84.6 + [8,9,10]
OsCML2 LOC_Os11g03980 11 552 183 4 4.9 70.3 +
OsCML3 LOC_Os12g03816 12 552 183 4 4.9 68.9 +
OsCML4 LOC_Os03g53200 3 465 154 4 6.5 68.9 + +
OsCML5 LOC_Os12g41110 12 501 166 4 4.8 62.2 + +
OsCML6 LOC_Os11g37550 11 513 170 4 6.5 53.9 +
OsCML7 LOC_Os08g02420 8 447 148 2 2.8 47.7 +
OsCML8 LOC_Os10g25010 10 576 191 4 5.2 47.0
OsCML9 LOC_Os05g41200 5 468 155 1 3.2 46.1
OsCML10 LOC_Os01g72100 1 558 185 4 4.3 45.6 +
OsCML11 LOC_Os01g32120 1 636 211 4 1.4 44.1
OsCML12 LOC_Os01g41990 1 750 249 4 2.8 43.9
OsCML13 LOC_Os07g42660 7 510 169 4 5.3 43.6
OsCML14 LOC_Os05g50180 5 522 173 4 4.6 43.3
OsCML15 LOC_Os05g31620 5 606 201 4 4.0 40.7
OsCML16 LOC_Os01g04330 1 546 181 4 3.9 40.5
OsCML17 LOC_Os02g39380 2 495 164 4 4.9 37.7 +
OsCML18 LOC_Os05g13580 5 477 158 4 5.7 37.7 +
OsCML19 LOC_Os01g72550 1 441 146 3 7.5 37.2
OsCML20 LOC_Os02g50060 2 525 174 4 4.0 35.3 +
OsCML21 LOC_Os05g24780 5 594 197 3 4.6 35.3
OsCML22 LOC_Os04g41540 4 753 250 4 3.6 35.2
OsCML23 LOC_Os01g72540 1 456 151 3 7.9 35.1
OsCML24 LOC_Os07g48340 7 594 197 3 3.0 33.9
OsCML25 LOC_Os11g01390 11 450 149 3 6.7 33.6
OsCML26 LOC_Os12g01400 12 450 149 3 6.7 33.6
OsCML27 LOC_Os03g21380 3 573 190 3 3.2 33.3
OsCML28 LOC_Os12g12730 12 519 172 4 4.8 33.1 +
OsCML29 LOC_Os06g47640 6 513 170 3 4.1 33.1
OsCML30 LOC_Os06g07560 6 711 236 4 2.1 32.8
OsCML31 LOC_Os01g72530 1 456 151 3 5.3 31.6
OsCML32 LOC_Os08g04890 8 591 196 3 2.6 30.2

1 The Institute of Genomics Research (TIGR) gene identifier number.

2 Chromosome number in which the gene resides.

3 Length of the coding region in base pairs.

4 Number of amino acids of the deduced amino acid sequence.

5 Number of EF hands based on the prediction by InterProScan.

6 Percentage of methionine (M) residues in the deduced amino acid sequence.

7 Number of identical residues divided by the total number of amino acids that have been aligned expressed in percentage.

8 Presence of a cysteine equivalent to Cys26 of typical plant CaMs at residue 7(-Y) of the first EF-hand.

9 Presence of a lysine equivalent to Lys115 of typical plant CaMs.

10 Presence of a putative prenylation site.

11 Presence of a putative myristoylation site.