Skip to main content
. 2006 Nov 3;73(1):164–167. doi: 10.1128/AEM.01748-06

TABLE 2.

Numbers of RNA copies and numbers of infectious particles per liter in raw sewage and treated effluent samples positive for astrovirus genogroup Ba

Sample location, date No. of RNA copies/liter of raw sewageb CC-RT-PCR U/liter of raw sewagec No. of RNA copies/liter of treated effluent CC-RT-PCR U/liter of treated effluent
Balaks, Nov. 1998 3.8 × 105 3.3 × 103 9.9 × 104 3.3 × 102
Balaks, Jan. 1999 8.7 × 106 3.3 × 103 1.1 × 105 3.3 × 102
Balaks, May 1999 8.7 × 105 3.3 × 102 6.2 × 105 3.3 × 101
El-Berka, Nov. 1998 1.1 × 105 3.3 × 103 1.1 × 103 <3.3 × 100
El-Berka, July 1999 1.1 × 104 <3.3 × 100 NQ <3.3 × 100
El-Berka, Aug. 1999 1.1 × 104 <3.3 × 100 NQ <3.3 × 100
El-Berka, Sept. 1999 1.1 × 105 3.3 × 102 NQ <3.3 × 100
Zenin, Nov. 1998 9.9 × 105 3.3 × 103 1.1 × 103 <3.3 × 100
Zenin, Dec. 1998 5.4 × 106 3.3 × 105 NQ <3.3 × 100
Zenin, Jan. 1999 6.2 × 105 3.3 × 102 1.1 × 104 <3.3 × 100
Zenin, Feb. 1999 3.7 × 105 3.3 × 102 1.1 × 104 <3.3 × 100
Zenin, Apr. 1999 1.1 × 105 3.3 × 101 NQ <3.3 × 100
Zenin, May 1999 1.1 × 105 3.3 × 101 NQ <3.3 × 100
Zenin, June 1999 1.1 × 104 <3.3 × 100 NQ <3.3 × 100
Zenin, July 1999 1.1 × 104 <3.3 × 100 NQ <3.3 × 100
Zenin, Oct. 1999 1.1 × 105 3.3 × 102 1.1 × 103 <3.3 × 100
a

Reported values were determined by taking into consideration that 3-liter samples were concentrated to a final volume of 1 ml (3,000× concentration factor). NQ, nonquantifiable; the sample was positive only after Southern blot hybridization of the RT-PCR product.

b

The actual numbers of HAstV genogroup B copies in samples that also contained HAstV genogroup A were obtained by subtracting the number of genome copies estimated with primers A1/A2 (Table 1) from the numbers of genome copies estimated with primers A1, A1bis, and A2 internal.

c

The reciprocal endpoint dilution detected by CC-RT-PCR.