Table 3. Observed and Expected sequence distributions sorted by 5′ tag composition.
5′Tag | Sequences from forward primer | Sequences from reverse primer | Total sequences | Expected sequence frequency | Deviation |
AA | 141 | 115 | 256 | 274.75 | −18.75 |
AC | 179 | 113 | 292 | 274.75 | 17.25 |
AG | 68 | 65 | 133 | 274.75 | −141.75 |
AT | 95 | 93 | 188 | 274.75 | −86.75 |
CA | 237 | 231 | 468 | 274.75 | 193.25 |
CC | 305 | 326 | 631 | 274.75 | 356.25 |
CG | 291 | 286 | 577 | 274.75 | 302.25 |
CT | 263 | 258 | 521 | 274.75 | 246.25 |
GA | 171 | 153 | 324 | 274.75 | 49.25 |
GC | 114 | 93 | 207 | 274.75 | −67.75 |
GG | 166 | 146 | 312 | 274.75 | 37.25 |
GT | 178 | 152 | 330 | 274.75 | 55.25 |
TA | 127 | 86 | 213 | 366.33 | −153.33 |
TC | 113 | 111 | 224 | 366.33 | −142.33 |
TG | 105 | 87 | 192 | 366.33 | −174.33 |
TT | 110 | 100 | 210 | 366.33 | −156.33 |
4A* | 45 (gcta) | 60 (gtca) | 105 | 183,16 | −78,16 |
4B* | 48 (tcag) | 50 (tgac) | 98 | 274,75 | −176,75 |
4C* | 114 (ctag) | 100 (tagc) | 214 | 274,75 | −60,75 |
Total | 2870 | 2625 | 5495 | 5495 |
Sequence of the tetranucleotide tag in parentheses
Expected sequence frequencies are calculated to account for the number of initial PCRs commencing from each different 5′tag.