TABLE 2.
Isolate | NNRTI mutation(s) | % of NNRTI-resistant isolatesa | Change (fold) in EC50b
|
||
---|---|---|---|---|---|
VRX-480773 | Efavirenz | Nevirapine | |||
1 | 103N | 21.571 | 0.7 | 14.0 | 51.0 |
2 | 103N, 181C | 6.145 | 10.0 | >100 | >100 |
3 | 181C | 4.941 | 10.0 | 6.7 | >100 |
4 | 100I, 103N | 4.498 | 0.9 | >100 | 42.0 |
5 | 106I | 3.611 | 0.9 | 0.7 | 1.1 |
6 | 98G | 2.597 | 2.4 | 2.9 | 5.9 |
7 | 101Q | 2.534 | 2.2 | 2.5 | 2.8 |
8 | 103N, 225H | 2.407 | 1.6 | >100 | >100 |
9 | 103N, 225H | 2.407 | 1.0 | 89.0 | 93.0 |
10 | 188L | 2.312 | 11.0 | 86.0 | >100 |
11 | 103N, 108I | 2.249 | 1.3 | >100 | >100 |
12 | 179D | 1.932 | 3.3 | 5.7 | 4.2 |
13 | 190A | 1.457 | 13.0 | 18.0 | >100 |
14 | 181C, 190A | 1.457 | >100 | 14.0 | >100 |
15 | 103N, 190A | 1.425 | 76.0 | >100 | >100 |
16 | 101E | 1.362 | 11.0 | 16.0 | 42.0 |
17 | 108I | 1.362 | 1.5 | 1.7 | 2.3 |
18 | 103N, 181C, 190A | 1.172 | >100 | >100 | >100 |
19 | 101E, 190A | 1.109 | 83.0 | >100 | >100 |
20 | 103N, 238T | 1.077 | 0.6 | 31.0 | >100 |
21 | 98G, 103N | 1.014 | 4.4 | >100 | >100 |
22 | 101Q, 103N | 0.887 | 5.2 | >100 | >100 |
23 | 101P, 103N | 0.855 | 2.2 | >100 | >100 |
24 | 179E | 0.824 | 2.4 | 4.1 | 1.9 |
25 | 103N, 108I, 181C | 0.697 | 6.2 | 72.0 | >100 |
26 | 103N, 188L | 0.665 | 3.9 | >10.0 | >100 |
27 | 106A | 0.634 | 6.0 | 5.7 | >100 |
28 | 108I, 181C | 0.602 | 14.0 | 5.3 | >100 |
29 | 101E, 181C, 190A | 0.602 | >100 | >100 | >100 |
30 | 179A | 0.570 | 0.6 | 0.5 | 0.4 |
31 | 106A, F227L | 0.570 | >100 | >100 | >100 |
32 | 98G, 181C | 0.570 | 11.0 | 17.0 | >100 |
33 | 101Q, 181C, 190A | 0.570 | >100 | 43.0 | >100 |
34 | 190S | 0.507 | 3.9 | 97.0 | >100 |
35 | 101E, 190S | 0.475 | 16.0 | >100 | >100 |
36 | 190E | 0.443 | >100 | >100 | >100 |
37 | 106I, 188L | 0.443 | 62.0 | >100 | >100 |
38 | 103N, 106A | 0.412 | 2.6 | 26.0 | >100 |
39 | 179G | 0.348 | 0.3 | 0.2 | 0.1 |
40 | 227L | 0.348 | 0.47 | 0.80 | 2.10 |
41 | 103R, 179D, 188L | 0.348 | >100 | >100 | >100 |
42 | 101E, 181C | 0.317 | >100 | >100 | >100 |
43 | 103N, 106M | 0.317 | 12.0 | >100 | >100 |
44 | 103N, 106I | 0.317 | 1.8 | 28.0 | 122.0 |
45 | 103S, 190A | 0.285 | >100 | >100 | >100 |
46 | 181I | 0.285 | 5.4 | 1.4 | >100 |
47 | 179T | 0.285 | 1.3 | 0.8 | 0.5 |
48 | 101E, 181C, 190S | 0.285 | >100 | >100 | >100 |
49 | 101Q, 103R | 0.285 | 0.6 | 1.2 | 1.3 |
50 | 103R, 179D | 0.285 | 0.3 | 0.9 | 1.3 |
51 | 103N, 108I, 225H | 0.253 | 2.6 | >100 | >100 |
52 | 98G, 103N, 108I | 0.253 | 2.2 | >100 | >100 |
53 | 101P, 190A | 0.253 | 92.0 | >100 | >100 |
54 | 101R, 103N | 0.253 | 1.2 | 37.0 | >100 |
55 | 101Q, 190S | 0.253 | 2.4 | >100 | >100 |
56 | 98G, 190A | 0.253 | 16.0 | 64.0 | >100 |
57 | 106A, 190A | 0.253 | >100 | >100 | >100 |
58 | 101Q, 181C, 190S | 0.253 | >100 | >100 | >100 |
59 | 101E, 103N | 0.222 | 0.9 | 52.0 | >100 |
60 | 101Q, 181C | 0.222 | 8.9 | 4.4 | >100 |
61 | 236L | 0.222 | 0.9 | 0.2 | 0.5 |
62 | 101H, 190A | 0.222 | 32.0 | 77.0 | >100 |
63 | 98G, 188L | 0.222 | >100 | >100 | >100 |
64 | 98G, 103N, 181C | 0.190 | 4.2 | >100 | >100 |
65 | 101E, 108I, 181C, 190A | 0.190 | >100 | >100 | >100 |
66 | 103N, 108I, 238T | 0.190 | 2.5 | >100 | >100 |
67 | 98G, 100I, 103N | 0.190 | 1.4 | >100 | >100 |
68 | 100I, 103N, 108I | 0.190 | 1.9 | >100 | >100 |
69 | 103N, 188H | 0.190 | 3.5 | >100 | >100 |
70 | 188H | 0.190 | 1.6 | 8.7 | >100 |
71 | 98G, 101E, 181C, 190A | 0.190 | 65.0 | 71.0 | >100 |
72 | 103Q | 0.190 | 1.4 | 1.7 | 1.0 |
73 | 101H | 0.190 | 2.5 | 4.1 | 12.0 |
74 | 103N, 108I, 181C, 190A | 0.190 | >100 | >100 | >100 |
75 | 179D, 188L | 0.158 | >100 | >100 | >100 |
76 | 103N, 108I, 190A | 0.158 | 20.0 | >100 | >100 |
77 | 108I, 181C, 190A | 0.158 | >100 | 400 | >100 |
78 | 101Q, 103N, 225H | 0.158 | 3.9 | >100 | >100 |
79 | 98G, 103N, 181C, 190A | 0.158 | 82.0 | >100 | >100 |
80 | 103N, 190S | 0.158 | 18.0 | >100 | >100 |
81 | 106A, 181C | 0.158 | 16.0 | 8.2 | >100 |
82 | 98G, 108I, 181C | 0.158 | 15.0 | 47.0 | >100 |
83 | 238N | 0.158 | 0.7 | 0.8 | 1.9 |
84 | 238T | 0.127 | 2.2 | 3.0 | 100 |
85 | 103N, 238N | 0.127 | 2.3 | >100 | >100 |
86 | 103S | 0.127 | 2.7 | 8.6 | 39.0 |
87 | 230L | 0.127 | 11.0 | 16.0 | 46.0 |
88 | 101R, 103N, 181C, 190A | 0.127 | >100 | >100 | >100 |
89 | 101E, 103N, 190A | 0.127 | 50.0 | >100 | >100 |
90 | 101N, 103N | 0.127 | 0.6 | 26.0 | 32.0 |
91 | 181V | 0.127 | 20.0 | 4.5 | >100 |
92 | 106L, 188L | 0.127 | >100 | >100 | >100 |
93 | 179D, 181C | 0.127 | >100 | >100 | >100 |
94 | 100F | 0.127 | 1.8 | 1.6 | 2.4 |
Total | 88.312 |
Prevalance of mutation patterns was determined from sequence data in the Stanford HIV Resistance database (14).
Changes (n-fold) in EC50 relative to that against wt virus.