Table 3.

Comparative Assessment with Other Clustering Methods

	k-means	HC	STEM	Motifs
% enriched GO	0.11	0.13	0.35	0.30
% inflammation-specific enriched GO	0.40	0.40	0.50	0.79
% enriched TFs	0.08	0.13	0.28	0.17
% inflammation-specific enriched TFs	0.25	0.28	0.28	0.57