TABLE 3.
Genotypes of 50 C. albicans isolates analyzed by MLST
Strain | Site of isolation or source | Origin | Genotype
|
DST type | ABC typea | MLT typeb | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAT1a | AAT1b | MPI | ZWF1 | CaADP1 | CaSYA1 | CaRPN2 | CaVPS13 | ||||||
B59630 | Oral (AIDS) | Germany | 1 | 1 | 1 | 1 | 12 | 4 | 14 | 25 | 1 | A | Het |
81/193 | Sputum | USA | 1 | 1 | 1 | 2 | 13 | 14 | 14 | 21 | 2 | A | Het |
85/007 | Wound | London, UK | 2 | 2 | 2 | 3 | 17 | 15 | 17 | 26 | 3 | A | Het |
76/002 | Mouth | Leicester, UK | 1 | 1 | 1 | 4 | 12 | 4 | 14 | 25 | 4 | A | Het |
83/004 | Mouth | Germany | 1 | 1 | 3 | 2 | 13 | 4 | 14 | 27 | 5 | A | Het |
J951361 | Blood | Glasgow, UK | 3 | 1 | 3 | 2 | 13 | 4 | 14 | 28 | 6 | A | Het |
J990102 | Vagina | Belgium | 4 | 3 | 4 | 5 | 10 | 16 | 13 | 29 | 7 | B | Het |
J990578 | Mouth | France | 5 | 3 | 5 | 6 | 18 | 17 | 18 | 30 | 8 | A | a |
T26 | Derived from SC5314 | 3 | 4 | 6 | 2 | 13 | 4 | 14 | 3 | 9 | A | Het | |
2 | Cutaneous nodule | Spain | 6 | 5 | 7 | 7 | 19 | 18 | 14 | 30 | 10 | C | Het |
S9 | Sputum | Italy | 4 | 6 | 8 | 6 | 18 | 19 | 3 | 31 | 11 | C | α |
J942099 | Unknown | USA | 1 | 7 | 2 | 8 | 13 | 4 | 14 | 7 | 12 | A | Het |
J981367 | Vagina | USA | 7 | 1 | 6 | 8 | 13 | 4 | 14 | 32 | 13 | A | Het |
C82 | Mouth (AIDS) | Switzerland | 4 | 3 | 9 | 9 | 20 | 20 | 13 | 33 | 14 | B | Het |
CAF2 | Derived from SC5314 | 1 | 1 | 6 | 2 | 13 | 4 | 14 | 3 | 15 | A | Het | |
SC5314 | [Laboratory isolate] | 1 | 1 | 6 | 2 | 13 | 4 | 14 | 3 | 15 | A | Het | |
293 | Nose | London, UK | 8 | 8 | 10 | 1 | 21 | 21 | 3 | 34 | 16 | A | Het |
NCPF 3153a | Reference isolate | UK | 3 | 1 | 10 | 2 | 12 | 4 | 14 | 35 | 17 | A | Het |
ATCC 32354 | =B311, reference isolate | USA | 9 | 9 | 11 | 1 | 1 | 22 | 14 | 36 | 18 | A | Het |
J981315 | Vagina | USA | 4 | 3 | 4 | 5 | 14 | 9 | 14 | 33 | 19 | B | Het |
73/034 | Mouth | Leeds, UK | 3 | 2 | 2 | 10 | 15 | 9 | 4 | 11 | 20 | B | Het |
J990681 | Blood | Canada | 10 | 10 | 1 | 3 | 1 | 23 | 3 | 37 | 21 | A | Het |
78/028 | Mouth | Leicester, UK | 1 | 1 | 1 | 2 | 12 | 4 | 14 | 7 | 22 | A | Het |
J981305 | Vagina | USA | 1 | 1 | 1 | 2 | 12 | 4 | 14 | 7 | 22 | A | Het |
J981301 | Vagina | USA | 1 | 1 | 1 | 2 | 13 | 4 | 14 | 3 | 23 | A | Het |
J990677 | Blood | Canada | 4 | 6 | 1 | 5 | 10 | 24 | 14 | 38 | 24 | B | Het |
81/192 | Unknown | USA | 2 | 1 | 1 | 2 | 13 | 4 | 14 | 21 | 25 | A | Het |
81/133 | Feces | USA | 1 | 1 | 1 | 11 | 13 | 4 | 14 | 7 | 26 | A | Het |
81/207 | Blood | USA | 10 | 3 | 6 | 12 | 22 | 25 | 19 | 30 | 27 | A | Het |
81/090 | Penis | Leicester, UK | 1 | 1 | 1 | 2 | 13 | 4 | 14 | 7 | 28 | A | Het |
J981303 | Vagina | USA | 1 | 1 | 1 | 2 | 13 | 4 | 14 | 7 | 28 | A | Het |
J981309 | Vagina | USA | 1 | 1 | 1 | 2 | 13 | 4 | 14 | 7 | 28 | A | Het |
76/004 | Mouth | Leicester, UK | 2 | 2 | 2 | 13 | 1 | 8 | 15 | 5 | 29 | A | Het |
J981313 | Vagina | USA | 11 | 2 | 12 | 14 | 1 | 8 | 14 | 39 | 30 | A | Het |
81/151 | Mouth | USA | 12 | 11 | 1 | 15 | 1 | 4 | 14 | 27 | 31 | A | Het |
J981326 | Vagina | USA | 13 | 3 | 13 | 16 | 6 | 12 | 20 | 40 | 32 | A | Het |
81/191 | Mouth | USA | 14 | 3 | 13 | 16 | 22 | 12 | 20 | 41 | 33 | A | Het |
J981317 | Vagina | USA | 4 | 3 | 4 | 17 | 10 | 9 | 13 | 33 | 34 | B | Het |
J981314 | Vagina | USA | 1 | 1 | 1 | 2 | 12 | 8 | 14 | 7 | 35 | A | Het |
J981325 | Vagina | USA | 3 | 1 | 6 | 18 | 12 | 4 | 14 | 7 | 36 | A | Het |
78/024 | Mouth | Leicester, UK | 2 | 2 | 1 | 19 | 23 | 26 | 15 | 42 | 37 | A | Het |
J981307 | Vagina | USA | 1 | 1 | 6 | 2 | 1 | 4 | 14 | 7 | 38 | A | Het |
2-76c | Mouth (AIDS) | USA | 1 | 1 | 6 | 2 | 13 | 4 | 14 | 7 | 39 | A | Het |
343d | Mouth | London, UK | 3 | 2 | 2 | 22 | 1 | 9 | 3 | 44 | 40 | B | Het |
81/156 | Faeces | USA | 1 | 1 | 1 | 3 | 1 | 4 | 14 | 6 | 41 | A | Het |
85/050 | Vagina | Leicester, UK | 15 | 2 | 1 | 21 | 16 | 10 | 9 | 43 | 42 | C | Het |
85/005 | Blood | London, UK | 3 | 4 | 1 | 15 | 1 | 4 | 14 | 7 | 43 | A | a |
85/045 | Anus | Leicester, UK | 1 | 1 | 6 | 20 | 13 | 4 | 14 | 7 | 44 | A | Het |
81/225 | Blood | USA | 10 | 9 | 13 | 20 | 1 | 27 | 14 | 7 | 45 | A | a |
J981318 | Vagina | USA | 3 | 4 | 1 | 2 | 1 | 4 | 14 | 6 | 46 | A | Het |
Determined by PCR of transcribed spacer region of rDNA region.
Determined by multiplex PCR of MLT locus.
From a series of 16 sequential isolates (35).
From a series of 12 isolates from a single patient with a hematological malignancy.